Detailed information NTG0697548

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NDR85_RS10605
• Genome accession: NZ_CP098738
• Coordinates: 2171917..2173047 (+)
• Length: 376 a.a.
• NCBI ID: WP_044155597.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XE48
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2166917..2178047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR85_RS10570 (NDR85_10540)	-	2167245..2167478 (+)	234	WP_227534022.1	hypothetical protein	-
NDR85_RS10575 (NDR85_10545)	-	2167606..2168118 (-)	513	WP_044155603.1	GNAT family N-acetyltransferase	-
NDR85_RS10580 (NDR85_10550)	-	2168492..2169025 (-)	534	WP_263870654.1	GNAT family N-acetyltransferase	-
NDR85_RS10585 (NDR85_10555)	-	2169110..2169532 (-)	423	WP_306481471.1	UPF0715 family protein	-
NDR85_RS20990	-	2169625..2169832 (-)	208	Protein_2039	hypothetical protein	-
NDR85_RS10595 (NDR85_10565)	-	2171154..2171414 (+)	261	WP_082687961.1	hypothetical protein	-
NDR85_RS10605 (NDR85_10575)	rapC	2171917..2173047 (+)	1131	WP_044155597.1	tetratricopeptide repeat protein	Regulator
NDR85_RS10610 (NDR85_10580)	-	2173037..2173180 (+)	144	WP_162264507.1	hypothetical protein	-
NDR85_RS10615 (NDR85_10585)	-	2173227..2173556 (-)	330	Protein_2043	UV damage repair protein UvrX	-
NDR85_RS10620 (NDR85_10590)	ppsA	2173851..2176454 (-)	2604	WP_044155596.1	phosphoenolpyruvate synthase	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44276.06 Da
• Isoelectric Point: 6.0304

>NTDB_id=697548 NDR85_RS10605 WP_044155597.1 2171917..2173047(+) (rapC) [Bacillus halotolerans strain XE48]
MEQLIPSSTVGVKINEWYKYIRMFAVPDAEILKAEVEEEIKHMKEDQDLLLYYSLMCFRHQLMLDYLEPKSLNEARPKIS
DLLEKIESSQTKLKGVLEYYCNFFRGMYEFDKKDYINAIRSYKIAEKKLALVTDEIERAEFYFKMAEVYYHMKQTHVSMH
YAEAALNIYKDQKTYTVRRIQCAFVVAGNFDDLESHEKAVPHLQRALKDSKAINKHKLIGASLYNLGNCYYKMKEYDKAA
EYIDQAVSLYENDKSDLLPHTLFTLTQIHFKMKDIEKALVLYKKGIEKAKAINDDVLIAEFNYLKALYIDSIDKRTVFRT
FSVLKDNVMYPDLEELALDTANYCKEIGQFENSTTFFDVMVDVRIQIQRGECLYEI

Nucleotide

• Length: 1131 bp

>NTDB_id=697548 NDR85_RS10605 WP_044155597.1 2171917..2173047(+) (rapC) [Bacillus halotolerans strain XE48]
ATGGAGCAATTAATTCCGTCATCCACGGTTGGAGTTAAAATCAATGAGTGGTATAAATACATACGGATGTTCGCCGTTCC
AGATGCTGAGATATTAAAAGCAGAGGTTGAAGAAGAAATAAAACATATGAAGGAAGATCAAGACTTATTGCTGTATTATT
CTCTAATGTGTTTTCGTCATCAGCTAATGCTGGATTACCTTGAACCTAAGTCATTGAATGAAGCACGCCCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGCAGCCAAACAAAGCTTAAAGGTGTCCTGGAATACTACTGCAATTTCTTTAGAGGAAT
GTATGAATTTGATAAGAAGGATTATATAAATGCAATAAGGTCATATAAAATTGCTGAGAAAAAGCTCGCTTTAGTAACAG
ATGAAATTGAACGAGCTGAGTTTTATTTCAAAATGGCTGAAGTGTATTATCACATGAAACAAACCCATGTATCAATGCAC
TATGCTGAAGCAGCCCTTAACATTTATAAAGACCAAAAAACTTATACTGTTCGCCGAATACAATGTGCATTTGTTGTAGC
AGGCAACTTTGATGATCTGGAAAGTCATGAAAAAGCAGTTCCCCATCTTCAGAGAGCCCTAAAAGACTCAAAAGCCATAA
ACAAGCACAAACTAATTGGGGCATCATTATATAATTTGGGGAACTGTTATTATAAAATGAAAGAGTATGACAAAGCTGCT
GAATATATTGATCAAGCAGTCTCATTGTACGAAAACGATAAAAGTGATCTTCTCCCTCACACGTTATTTACGCTGACACA
AATTCACTTTAAAATGAAGGATATTGAAAAAGCCTTGGTTCTTTACAAAAAAGGAATCGAGAAAGCAAAAGCAATAAATG
ACGATGTCTTAATTGCTGAGTTTAATTACTTAAAGGCTTTATATATCGACTCTATAGATAAACGCACAGTTTTCCGAACT
TTTTCTGTACTTAAAGATAATGTTATGTATCCAGATTTAGAGGAATTAGCACTCGACACGGCTAATTATTGTAAGGAGAT
AGGGCAATTTGAAAACTCAACCACCTTTTTTGACGTCATGGTGGATGTCCGAATCCAAATACAAAGAGGAGAGTGTTTAT
ATGAAATTTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (221-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	50.532	100	0.505
rapF	Bacillus subtilis subsp. subtilis str. 168	45.119	100	0.455