Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LC189_RS10330 Genome accession   NZ_CP098727
Coordinates   2138925..2139590 (+) Length   221 a.a.
NCBI ID   WP_224826888.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SauR3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2133925..2144590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LC189_RS10305 (LC189_010305) - 2135333..2136094 (+) 762 WP_000323448.1 alpha/beta hydrolase family protein -
  LC189_RS10310 (LC189_010310) - 2136339..2136794 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  LC189_RS10315 (LC189_010315) - 2136916..2137017 (+) 102 WP_000731976.1 SE2200 family small protein -
  LC189_RS10320 (LC189_010320) - 2137077..2138501 (-) 1425 WP_224826889.1 alkaline phosphatase -
  LC189_RS10325 (LC189_010325) - 2138699..2138899 (+) 201 WP_000604727.1 hypothetical protein -
  LC189_RS10330 (LC189_010330) braR 2138925..2139590 (+) 666 WP_224826888.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  LC189_RS10335 (LC189_010335) braS 2139601..2140488 (+) 888 WP_000143419.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  LC189_RS10340 (LC189_010340) - 2140596..2141351 (+) 756 WP_001836721.1 ABC transporter ATP-binding protein -
  LC189_RS10345 (LC189_010345) - 2141348..2143348 (+) 2001 WP_224826887.1 ABC transporter permease -
  LC189_RS10350 (LC189_010350) - 2144014..2144127 (+) 114 WP_011447078.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25487.60 Da        Isoelectric Point: 4.7961

>NTDB_id=697419 LC189_RS10330 WP_224826888.1 2138925..2139590(+) (braR) [Staphylococcus aureus strain SauR3]
MKILIVEDDFVIAESLTSELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKISNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTISVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=697419 LC189_RS10330 WP_224826888.1 2138925..2139590(+) (braR) [Staphylococcus aureus strain SauR3]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAACATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAATATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTAGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

98.643

100

0.986