Detailed information NTG0697102

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: PCP20_RS28765
• Genome accession: NZ_CP115225
• Coordinates: 6151547..6152572 (-)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain F054
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6146547..6157572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCP20_RS28740 (PCP20_28740)	aroE	6146749..6147573 (-)	825	WP_003111201.1	shikimate dehydrogenase	-
PCP20_RS28745 (PCP20_28745)	hemF	6147631..6148548 (-)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
PCP20_RS28750 (PCP20_28750)	-	6148739..6149716 (+)	978	WP_003111202.1	NADPH:quinone reductase	-
PCP20_RS28755 (PCP20_28755)	-	6149726..6150283 (-)	558	WP_003097300.1	L-threonylcarbamoyladenylate synthase	-
PCP20_RS28760 (PCP20_28760)	dprA	6150324..6151412 (-)	1089	WP_003123764.1	DNA-processing protein DprA	Machinery gene
PCP20_RS28765 (PCP20_28765)	tsaP	6151547..6152572 (-)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
PCP20_RS28770 (PCP20_28770)	def	6152711..6153217 (+)	507	WP_003107059.1	peptide deformylase	-
PCP20_RS28775 (PCP20_28775)	fmt	6153272..6154216 (+)	945	WP_010793609.1	methionyl-tRNA formyltransferase	-
PCP20_RS28780 (PCP20_28780)	rsmB	6154213..6155517 (+)	1305	WP_003458403.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PCP20_RS28785 (PCP20_28785)	trkA	6155545..6156918 (+)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
PCP20_RS28790 (PCP20_28790)	-	6157067..6157384 (+)	318	WP_003120685.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=697102 PCP20_RS28765 WP_003097294.1 6151547..6152572(-) (tsaP) [Pseudomonas aeruginosa strain F054]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=697102 PCP20_RS28765 WP_003097294.1 6151547..6152572(-) (tsaP) [Pseudomonas aeruginosa strain F054]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393