Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NDQ64_RS05980 Genome accession   NZ_CP098544
Coordinates   1145066..1145527 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae strain 10296     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1140066..1150527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDQ64_RS05945 (NDQ64_05880) - 1140099..1141313 (-) 1215 WP_003690983.1 pyridoxal phosphate-dependent aminotransferase -
  NDQ64_RS05950 (NDQ64_05885) - 1141402..1141611 (-) 210 WP_003688192.1 4-oxalocrotonate tautomerase family protein -
  NDQ64_RS05955 (NDQ64_05890) - 1141803..1142609 (+) 807 WP_003690982.1 DUF4198 domain-containing protein -
  NDQ64_RS11995 - 1142669..1143888 (-) 1220 Protein_1155 Glu/Leu/Phe/Val dehydrogenase -
  NDQ64_RS05975 (NDQ64_05910) - 1144283..1144993 (+) 711 WP_003690977.1 phosphoglycolate phosphatase -
  NDQ64_RS05980 (NDQ64_05915) recX 1145066..1145527 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  NDQ64_RS05985 (NDQ64_05920) - 1145601..1145762 (+) 162 WP_025455785.1 hypothetical protein -
  NDQ64_RS05990 (NDQ64_05925) - 1145915..1146397 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  NDQ64_RS05995 (NDQ64_05930) - 1146795..1147808 (-) 1014 WP_025455948.1 peptidoglycan DD-metalloendopeptidase family protein -
  NDQ64_RS06000 (NDQ64_05935) surE 1147910..1148656 (-) 747 WP_003690973.1 5'/3'-nucleotidase SurE -
  NDQ64_RS06005 (NDQ64_05940) - 1148673..1150229 (-) 1557 WP_012503518.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=696879 NDQ64_RS05980 WP_003688187.1 1145066..1145527(+) (recX) [Neisseria gonorrhoeae strain 10296]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=696879 NDQ64_RS05980 WP_003688187.1 1145066..1145527(+) (recX) [Neisseria gonorrhoeae strain 10296]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1