Detailed information NTG0069641

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: UNDYM_RS24985
• Genome accession: NZ_AP018441
• Coordinates: 5456443..5457537 (+)
• Length: 364 a.a.
• NCBI ID: WP_162043542.1
• Uniprot ID: A0A809R9R7
• Organism: Undibacterium sp. YM2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5451443..5462537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UNDYM_RS24955 (UNDYM_4975)	-	5451615..5452607 (+)	993	WP_162043537.1	GlxA family transcriptional regulator	-
UNDYM_RS24960 (UNDYM_4976)	-	5452771..5453538 (+)	768	WP_370529389.1	MOSC domain-containing protein	-
UNDYM_RS24965 (UNDYM_4977)	-	5453625..5454770 (+)	1146	WP_162043538.1	sensor domain-containing diguanylate cyclase	-
UNDYM_RS24970 (UNDYM_4978)	-	5454777..5455043 (-)	267	WP_162043539.1	YfhL family 4Fe-4S dicluster ferredoxin	-
UNDYM_RS24975 (UNDYM_4979)	coaD	5455083..5455583 (-)	501	WP_162043540.1	pantetheine-phosphate adenylyltransferase	-
UNDYM_RS24980 (UNDYM_4980)	rsmD	5455639..5456334 (-)	696	WP_162043541.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
UNDYM_RS24985 (UNDYM_4981)	pilA	5456443..5457537 (+)	1095	WP_162043542.1	signal recognition particle-docking protein FtsY	Machinery gene
UNDYM_RS24990 (UNDYM_4982)	-	5457564..5458238 (+)	675	WP_162043543.1	cell division ATP-binding protein FtsE	-
UNDYM_RS24995 (UNDYM_4983)	-	5458270..5459184 (+)	915	WP_162043544.1	ABC transporter permease	-
UNDYM_RS25000 (UNDYM_4984)	rpoH	5459521..5460417 (+)	897	WP_162043545.1	RNA polymerase sigma factor RpoH	-
UNDYM_RS25005 (UNDYM_4985)	-	5460592..5461173 (-)	582	WP_162043546.1	SCO family protein	-
UNDYM_RS25010 (UNDYM_4986)	cyoE	5461170..5462054 (-)	885	WP_162043547.1	heme o synthase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 38847.89 Da
• Isoelectric Point: 5.7637

>NTDB_id=69641 UNDYM_RS24985 WP_162043542.1 5456443..5457537(+) (pilA) [Undibacterium sp. YM2]
MFSFFKKKPKEEAPVVVADPAPLVTAPGSHEAVVPAPAAEVTSLVTSLQTPAQAEVLAAKPQEPEQKRSWLSRLKAGLAK
TSSNLTTLFIGARIDDDLYEELEAALLTSDAGVEATQFLLDGLKKKVKEEKLTDAEQVKAALKALLLELLTPLQKPLELG
RYQPLVMMITGVNGAGKTTTIGKLAKHMQSHHQSVLLAAGDTFRAAAREQLTIWGERNNVTVIAQESGDPAAVAFDAVAS
ARARGTDVVMVDTAGRLPTQLHLMEELKKIKRVIAKGMDGAPQEVLLIIDGNTGQNALAQVKAFDDALQLTGLVITKLDG
TAKGGVLAAIAKNRPVPVYFIGIGEQIEDLQPFNAQEFVDALLS

Nucleotide

• Length: 1095 bp

>NTDB_id=69641 UNDYM_RS24985 WP_162043542.1 5456443..5457537(+) (pilA) [Undibacterium sp. YM2]
ATGTTTAGTTTTTTCAAAAAGAAGCCCAAAGAAGAGGCGCCAGTTGTTGTGGCTGATCCGGCACCGCTAGTCACTGCGCC
AGGCAGTCATGAGGCTGTTGTTCCTGCGCCAGCGGCTGAAGTTACGTCACTTGTTACGTCACTTCAGACTCCTGCGCAGG
CAGAAGTACTTGCCGCCAAGCCACAAGAACCTGAGCAAAAACGCTCATGGTTAAGCCGCCTGAAAGCCGGGCTGGCCAAA
ACATCCTCGAATCTTACCACCCTCTTCATCGGTGCCCGCATTGATGATGATTTGTATGAAGAACTTGAAGCTGCCCTGCT
GACCTCGGATGCAGGTGTCGAAGCTACCCAGTTCCTGCTCGATGGCCTGAAGAAAAAGGTCAAGGAAGAAAAGCTGACTG
ATGCAGAGCAAGTCAAGGCGGCCCTCAAAGCCCTGTTGCTGGAATTGCTGACCCCCTTGCAAAAACCGCTGGAACTGGGT
CGTTACCAACCCCTGGTCATGATGATCACCGGTGTCAATGGTGCGGGCAAGACCACCACCATAGGCAAGCTGGCCAAACA
TATGCAAAGCCACCATCAGTCAGTATTGCTGGCTGCGGGCGACACCTTCCGTGCGGCAGCGCGTGAGCAATTGACCATCT
GGGGCGAGCGCAATAATGTCACTGTCATCGCGCAAGAATCCGGCGACCCGGCGGCGGTGGCGTTTGATGCAGTGGCATCT
GCCCGCGCCCGTGGTACTGATGTAGTGATGGTGGATACAGCAGGCCGCCTGCCTACCCAGTTGCATCTGATGGAAGAACT
CAAAAAAATCAAACGCGTCATCGCCAAGGGTATGGATGGTGCACCACAAGAAGTATTGCTGATCATCGACGGCAACACTG
GCCAGAATGCCCTGGCCCAGGTCAAGGCCTTTGACGATGCGCTGCAACTGACTGGCCTGGTCATCACCAAACTTGATGGC
ACAGCCAAAGGTGGCGTGCTGGCAGCAATCGCCAAGAACCGCCCTGTGCCCGTGTATTTCATCGGCATAGGCGAGCAGAT
TGAAGATTTGCAGCCGTTTAACGCCCAGGAATTTGTTGACGCCCTGCTCAGTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (85-144)

• SRP54-type protein, GTPase domain (SRP54) (165-363)

3D structure

• AlphaFold DB: A0A809R9R7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.76	100	0.569