Detailed information NTG0696272

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NDK36_RS06200
• Genome accession: NZ_CP098491
• Coordinates: 1191528..1192481 (+)
• Length: 317 a.a.
• NCBI ID: WP_014479436.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain NB205
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1186528..1197481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDK36_RS06170 (NDK36_06170)	argF	1187070..1188029 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
NDK36_RS06180 (NDK36_06180)	yjzC	1189405..1189584 (+)	180	WP_003245356.1	YjzC family protein	-
NDK36_RS06185 (NDK36_06185)	yjzD	1189630..1189815 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
NDK36_RS06190 (NDK36_06190)	-	1190064..1190798 (+)	735	WP_014479433.1	hypothetical protein	-
NDK36_RS06195 (NDK36_06195)	-	1190880..1191437 (+)	558	WP_014479435.1	hypothetical protein	-
NDK36_RS06200 (NDK36_06200)	med	1191528..1192481 (+)	954	WP_014479436.1	transcriptional regulator Med	Regulator
NDK36_RS06205 (NDK36_06205)	comZ	1192496..1192687 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
NDK36_RS06210 (NDK36_06210)	yjzB	1192717..1192944 (-)	228	WP_031600361.1	spore coat protein YjzB	-
NDK36_RS06215 (NDK36_06215)	fabH	1193109..1194047 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
NDK36_RS06220 (NDK36_06220)	fabF	1194070..1195311 (+)	1242	WP_014479438.1	beta-ketoacyl-ACP synthase II	-
NDK36_RS06225 (NDK36_06225)	yjaZ	1195387..1196172 (+)	786	WP_014479439.1	DUF2268 domain-containing protein	-
NDK36_RS06230 (NDK36_06230)	appD	1196364..1197350 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.88 Da
• Isoelectric Point: 4.6652

>NTDB_id=696272 NDK36_RS06200 WP_014479436.1 1191528..1192481(+) (med) [Bacillus subtilis strain NB205]
MITRLVMIFSVLLLLSGCGKTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=696272 NDK36_RS06200 WP_014479436.1 1191528..1192481(+) (med) [Bacillus subtilis strain NB205]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGAAAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.369	100	0.994