Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NDK36_RS04615 Genome accession   NZ_CP098491
Coordinates   900294..901088 (+) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain NB205     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 895294..906088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NDK36_RS04585 (NDK36_04585) sxzA 896134..897165 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  NDK36_RS04590 (NDK36_04590) yfhB 897280..898161 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  NDK36_RS04595 (NDK36_04595) yfhC 898249..898833 (+) 585 WP_033881364.1 nitroreductase -
  NDK36_RS04600 (NDK36_04600) yfhD 898872..899063 (-) 192 WP_014479215.1 YfhD family protein -
  NDK36_RS04605 (NDK36_04605) yfhE 899129..899239 (-) 111 WP_003223230.1 YfhE family protein -
  NDK36_RS04610 (NDK36_04610) yfhF 899294..900205 (-) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  NDK36_RS04615 (NDK36_04615) recX 900294..901088 (+) 795 WP_014479217.1 recombination regulator RecX Regulator
  NDK36_RS04620 (NDK36_04620) yfhH 901090..901404 (+) 315 WP_003244592.1 YfhH family protein -
  NDK36_RS04625 (NDK36_04625) yfhI 901547..902740 (+) 1194 WP_003243500.1 MFS transporter -
  NDK36_RS04630 (NDK36_04630) sspK 902772..902924 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NDK36_RS04635 (NDK36_04635) yfhJ 903049..903318 (+) 270 WP_003243789.1 YfhJ family protein -
  NDK36_RS04640 (NDK36_04640) yfhK 903463..903981 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  NDK36_RS04645 (NDK36_04645) spdL 904066..904398 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  NDK36_RS04650 (NDK36_04650) ephM 904385..905245 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=696265 NDK36_RS04615 WP_014479217.1 900294..901088(+) (recX) [Bacillus subtilis strain NB205]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=696265 NDK36_RS04615 WP_014479217.1 900294..901088(+) (recX) [Bacillus subtilis strain NB205]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992