Detailed information NTG0069619

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: UNDKW_RS25025
• Genome accession: NZ_AP018439
• Coordinates: 5569421..5570515 (+)
• Length: 364 a.a.
• NCBI ID: WP_162060959.1
• Uniprot ID: -
• Organism: Undibacterium sp. KW1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5564421..5575515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UNDKW_RS24995 (UNDKW_4995)	-	5564593..5565585 (+)	993	WP_162060956.1	GlxA family transcriptional regulator	-
UNDKW_RS25000 (UNDKW_4996)	-	5565749..5566591 (+)	843	WP_162060957.1	MOSC domain-containing protein	-
UNDKW_RS25005 (UNDKW_4997)	-	5566616..5567749 (+)	1134	WP_174247615.1	DUF484 family protein	-
UNDKW_RS25010 (UNDKW_4998)	-	5567756..5568022 (-)	267	WP_162043539.1	YfhL family 4Fe-4S dicluster ferredoxin	-
UNDKW_RS25015 (UNDKW_4999)	coaD	5568062..5568562 (-)	501	WP_162043540.1	pantetheine-phosphate adenylyltransferase	-
UNDKW_RS25020 (UNDKW_5000)	rsmD	5568618..5569289 (-)	672	WP_162062104.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
UNDKW_RS25025 (UNDKW_5001)	pilA	5569421..5570515 (+)	1095	WP_162060959.1	signal recognition particle-docking protein FtsY	Machinery gene
UNDKW_RS25030 (UNDKW_5002)	-	5570542..5571216 (+)	675	WP_162043543.1	cell division ATP-binding protein FtsE	-
UNDKW_RS25035 (UNDKW_5003)	-	5571248..5572162 (+)	915	WP_162060960.1	ABC transporter permease	-
UNDKW_RS25040 (UNDKW_5004)	rpoH	5572499..5573395 (+)	897	WP_110256444.1	RNA polymerase sigma factor RpoH	-
UNDKW_RS25045 (UNDKW_5005)	-	5573524..5574077 (-)	554	Protein_4982	SCO family protein	-
UNDKW_RS25050 (UNDKW_5006)	cyoE	5574101..5574985 (-)	885	WP_162060961.1	heme o synthase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 38810.87 Da
• Isoelectric Point: 5.8155

>NTDB_id=69619 UNDKW_RS25025 WP_162060959.1 5569421..5570515(+) (pilA) [Undibacterium sp. KW1]
MFSFFKKKPKEEAPVVVADPAPLVTAPGSHEAVVPAPAAEVTSLATSLQTPAKAEVLAAKPQEPEQKRSWLSRLKAGLAK
TSSNLTTLFIGARIDDDLYEELEAALLTSDAGVEATQFLLDGLKKKVKEEKLTDAEQVKAALKALLLELLTPLQKPLELG
RYQPLVMMITGVNGAGKTTTIGKLAKHMQSHQQSVLLAAGDTFRAAAREQLTIWGERNNVTVIAQESGDPAAVAFDAVAS
ARARGTDVVMVDTAGRLPTQLHLMEELKKIKRVIAKGMDGAPQEVLLIIDGNTGQNALAQVKAFDDALQLTGLVITKLDG
TAKGGVLAAIAKNRPVPVYFIGIGEQIEDLQPFNAQEFVDALLS

Nucleotide

• Length: 1095 bp

>NTDB_id=69619 UNDKW_RS25025 WP_162060959.1 5569421..5570515(+) (pilA) [Undibacterium sp. KW1]
ATGTTTAGTTTTTTCAAAAAGAAGCCCAAAGAAGAGGCGCCAGTTGTTGTGGCTGATCCGGCACCGCTAGTCACTGCGCC
AGGCAGTCATGAGGCTGTTGTTCCTGCGCCAGCGGCTGAAGTTACGTCACTTGCTACATCACTTCAGACTCCCGCCAAGG
CAGAAGTACTTGCCGCCAAGCCGCAAGAACCTGAACAAAAACGCTCATGGTTAAGCCGCCTGAAAGCCGGGCTGGCCAAA
ACATCCTCGAATCTTACCACCCTCTTCATCGGTGCCCGCATTGATGATGATTTGTATGAAGAACTCGAAGCTGCCCTGCT
GACCTCGGATGCGGGTGTAGAAGCCACCCAGTTCCTGCTCGATGGCCTGAAGAAAAAGGTCAAGGAAGAAAAGCTGACTG
ATGCCGAGCAAGTCAAGGCGGCCCTCAAAGCCCTGTTGCTGGAATTGCTGACACCCTTGCAAAAACCGCTGGAACTGGGT
CGTTACCAACCCCTGGTCATGATGATCACCGGTGTCAATGGTGCGGGCAAGACCACCACCATAGGCAAGCTGGCCAAACA
CATGCAAAGCCACCAGCAGTCGGTATTGCTGGCTGCGGGCGACACCTTCCGTGCGGCAGCGCGTGAGCAATTAACGATCT
GGGGCGAGCGCAATAATGTCACTGTCATCGCGCAAGAATCCGGCGACCCGGCGGCGGTGGCGTTTGATGCGGTGGCATCT
GCCCGTGCCCGTGGCACAGATGTGGTCATGGTGGATACGGCTGGCCGCCTGCCTACCCAGTTGCATCTGATGGAAGAACT
CAAAAAGATCAAACGCGTCATCGCCAAGGGCATGGATGGCGCACCACAAGAAGTCTTACTCATCATCGACGGCAACACTG
GCCAGAACGCCCTGGCCCAGGTCAAGGCCTTTGACGATGCGCTGCAACTGACTGGCCTGGTCATCACCAAACTTGATGGC
ACAGCCAAAGGTGGCGTGCTGGCAGCAATCGCCAAGAACCGCCCTGTGCCTGTGTATTTCATCGGTATAGGCGAGCAGAT
TGAAGATTTGCAGCCGTTTAACGCCCAGGAATTTGTTGACGCCCTGCTCAGTTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (165-363)

• SRP54-type protein, helical bundle domain (SRP54_N) (85-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.282	100	0.566