Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   UNDKW_RS04320 Genome accession   NZ_AP018439
Coordinates   960043..960435 (+) Length   130 a.a.
NCBI ID   WP_110255216.1    Uniprot ID   A0A318JJK3
Organism   Undibacterium sp. KW1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 955043..965435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UNDKW_RS04300 (UNDKW_0864) - 956045..957322 (+) 1278 WP_162057718.1 amidohydrolase family protein -
  UNDKW_RS04305 (UNDKW_0865) hemL 957393..958673 (-) 1281 WP_162057719.1 glutamate-1-semialdehyde 2,1-aminomutase -
  UNDKW_RS04310 (UNDKW_0866) - 958772..959605 (-) 834 WP_162039913.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  UNDKW_RS04315 (UNDKW_0867) - 959774..959926 (+) 153 WP_110255217.1 rubredoxin -
  UNDKW_RS04320 (UNDKW_0868) pilG 960043..960435 (+) 393 WP_110255216.1 PleD family two-component system response regulator Regulator
  UNDKW_RS04325 (UNDKW_0869) - 960475..960840 (+) 366 WP_162039914.1 response regulator transcription factor -
  UNDKW_RS04330 (UNDKW_0870) - 960906..961490 (+) 585 WP_232063233.1 chemotaxis protein CheW -
  UNDKW_RS04335 (UNDKW_0871) - 961549..963885 (+) 2337 WP_162057720.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14361.56 Da        Isoelectric Point: 6.9504

>NTDB_id=69606 UNDKW_RS04320 WP_110255216.1 960043..960435(+) (pilG) [Undibacterium sp. KW1]
MSTLTGNENLKIMVIDDSSTIRRSAEIFLGQAGYKIVLAEDGFDALAKINDSHPDLIFCDILMPRLDGYQTCALIKKSAK
FRDTPVIMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKTVKNYTSAT

Nucleotide


Download         Length: 393 bp        

>NTDB_id=69606 UNDKW_RS04320 WP_110255216.1 960043..960435(+) (pilG) [Undibacterium sp. KW1]
ATGTCAACGTTGACAGGCAACGAGAACTTGAAAATCATGGTGATTGACGATAGCAGCACCATACGCCGTTCGGCCGAGAT
TTTTCTTGGTCAGGCCGGATACAAAATAGTGTTGGCAGAAGATGGCTTTGATGCACTCGCCAAGATTAACGATTCTCATC
CAGACCTGATTTTTTGCGATATCCTCATGCCTAGGCTGGACGGATATCAAACTTGCGCTTTGATTAAAAAAAGCGCGAAA
TTCCGGGATACACCGGTAATTATGTTGTCTTCTAAGGACGGTTTATTTGACCGTGCCCGTGGCGCAATGGTCGGCTCTGA
TGAGTACCTGACCAAGCCTTTTACAAAGGACAGTCTGCTGAAAACGGTAAAGAATTACACTTCGGCGACCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A318JJK3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.115

93.846

0.592

Multiple sequence alignment