Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | NCL52_RS06335 | Genome accession | NZ_CP098417 |
| Coordinates | 1229169..1230320 (+) | Length | 383 a.a. |
| NCBI ID | WP_086343707.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain N2-10 | ||
| Function | homologous recombination; DNA uptake (predicted from homology) Homologous recombination DNA binding and uptake |
||
Genomic Context
Location: 1224169..1235320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NCL52_RS06300 (NCL52_06300) | yjbB | 1224629..1225846 (+) | 1218 | WP_086344583.1 | MFS transporter | - |
| NCL52_RS06305 (NCL52_06305) | yjbC | 1226010..1226588 (+) | 579 | WP_003224597.1 | GNAT family N-acetyltransferase | - |
| NCL52_RS06310 (NCL52_06310) | spx | 1226769..1227164 (+) | 396 | WP_014476435.1 | transcriptional regulator Spx | - |
| NCL52_RS06315 (NCL52_06315) | yjbE | 1227419..1228075 (-) | 657 | WP_003232944.1 | TerC family protein | - |
| NCL52_RS06320 (NCL52_06320) | - | 1228245..1228385 (+) | 141 | WP_119122854.1 | hypothetical protein | - |
| NCL52_RS06325 (NCL52_06325) | mecA | 1228352..1229008 (+) | 657 | WP_003245194.1 | adaptor protein MecA | Regulator |
| NCL52_RS06330 (NCL52_06330) | - | 1229003..1229125 (-) | 123 | WP_003245684.1 | hypothetical protein | - |
| NCL52_RS06335 (NCL52_06335) | coiA | 1229169..1230320 (+) | 1152 | WP_086343707.1 | competence protein CoiA | Machinery gene |
| NCL52_RS06340 (NCL52_06340) | pepF | 1230550..1232379 (+) | 1830 | WP_003245178.1 | oligoendopeptidase F | - |
| NCL52_RS06345 (NCL52_06345) | - | 1232417..1232584 (-) | 168 | WP_003244944.1 | hypothetical protein | - |
| NCL52_RS06350 (NCL52_06350) | spxH | 1232899..1233798 (-) | 900 | WP_024573348.1 | protease adaptor protein SpxH | - |
| NCL52_RS06355 (NCL52_06355) | bhbI | 1233795..1234193 (-) | 399 | WP_003232928.1 | group 2 truncated hemoglobin YjbI | - |
| NCL52_RS06360 (NCL52_06360) | cwlQ | 1234445..1235179 (-) | 735 | WP_017695685.1 | bifunctional muramidase/murein lytic transglycosylase | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 44958.00 Da Isoelectric Point: 9.8077
>NTDB_id=695367 NCL52_RS06335 WP_086343707.1 1229169..1230320(+) (coiA) [Bacillus subtilis strain N2-10]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPEGGIHSMQDLIERDRSCFIE
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPEGGIHSMQDLIERDRSCFIE
Nucleotide
Download Length: 1152 bp
>NTDB_id=695367 NCL52_RS06335 WP_086343707.1 1229169..1230320(+) (coiA) [Bacillus subtilis strain N2-10]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGAGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTACTGAATCAGCCTGAAGGCGGCATACACTCAATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGAGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTACTGAATCAGCCTGAAGGCGGCATACACTCAATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Bacillus subtilis subsp. subtilis str. 168 |
98.123 |
97.389 |
0.956 |