Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NCL52_RS06215 Genome accession   NZ_CP098417
Coordinates   1206669..1206860 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain N2-10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1201669..1211860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCL52_RS06185 (NCL52_06185) argF 1202532..1203491 (+) 960 WP_134982186.1 ornithine carbamoyltransferase -
  NCL52_RS06190 (NCL52_06190) yjzC 1203577..1203756 (+) 180 WP_003245356.1 YjzC family protein -
  NCL52_RS06195 (NCL52_06195) yjzD 1203802..1203987 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NCL52_RS06200 (NCL52_06200) - 1204237..1204971 (+) 735 WP_003245223.1 hypothetical protein -
  NCL52_RS06205 (NCL52_06205) - 1205053..1205610 (+) 558 WP_137200718.1 hypothetical protein -
  NCL52_RS06210 (NCL52_06210) med 1205701..1206654 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NCL52_RS06215 (NCL52_06215) comZ 1206669..1206860 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NCL52_RS06220 (NCL52_06220) yjzB 1206890..1207126 (-) 237 WP_015383342.1 spore coat protein YjzB -
  NCL52_RS06225 (NCL52_06225) fabH 1207291..1208229 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NCL52_RS06230 (NCL52_06230) fabF 1208252..1209493 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  NCL52_RS06235 (NCL52_06235) yjaZ 1209569..1210354 (+) 786 WP_134982187.1 DUF2268 domain-containing protein -
  NCL52_RS06240 (NCL52_06240) appD 1210546..1211532 (+) 987 WP_134982188.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=695363 NCL52_RS06215 WP_003224559.1 1206669..1206860(+) (comZ) [Bacillus subtilis strain N2-10]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=695363 NCL52_RS06215 WP_003224559.1 1206669..1206860(+) (comZ) [Bacillus subtilis strain N2-10]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1