Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NCL52_RS04690 Genome accession   NZ_CP098417
Coordinates   924747..925541 (+) Length   264 a.a.
NCBI ID   WP_134982866.1    Uniprot ID   -
Organism   Bacillus subtilis strain N2-10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 919747..930541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCL52_RS04660 (NCL52_04660) sxzA 920587..921618 (+) 1032 WP_134982861.1 iron ABC transporter permease -
  NCL52_RS04665 (NCL52_04665) yfhB 921733..922614 (+) 882 WP_063335720.1 PhzF family phenazine biosynthesis protein -
  NCL52_RS04670 (NCL52_04670) yfhC 922702..923286 (+) 585 WP_129092338.1 nitroreductase -
  NCL52_RS04675 (NCL52_04675) yfhD 923325..923516 (-) 192 WP_014479215.1 YfhD family protein -
  NCL52_RS04680 (NCL52_04680) yfhE 923582..923692 (-) 111 WP_003223230.1 YfhE family protein -
  NCL52_RS04685 (NCL52_04685) yfhF 923747..924658 (-) 912 WP_130573256.1 TIGR01777 family oxidoreductase -
  NCL52_RS04690 (NCL52_04690) recX 924747..925541 (+) 795 WP_134982866.1 recombination regulator RecX Regulator
  NCL52_RS04695 (NCL52_04695) yfhH 925543..925857 (+) 315 WP_024573179.1 YfhH family protein -
  NCL52_RS04700 (NCL52_04700) yfhI 926000..927193 (+) 1194 WP_072692836.1 MFS transporter -
  NCL52_RS04705 (NCL52_04705) sspK 927225..927377 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NCL52_RS04710 (NCL52_04710) yfhJ 927502..927771 (+) 270 WP_003243789.1 YfhJ family protein -
  NCL52_RS04715 (NCL52_04715) yfhK 927916..928434 (+) 519 WP_137200672.1 SH3 domain-containing protein -
  NCL52_RS04720 (NCL52_04720) spdL 928519..928836 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  NCL52_RS04725 (NCL52_04725) ephM 928838..929698 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30997.27 Da        Isoelectric Point: 6.9997

>NTDB_id=695354 NCL52_RS04690 WP_134982866.1 924747..925541(+) (recX) [Bacillus subtilis strain N2-10]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDVTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=695354 NCL52_RS04690 WP_134982866.1 924747..925541(+) (recX) [Bacillus subtilis strain N2-10]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGTTACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACTAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996