Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BVS141_RS07385 Genome accession   NZ_AP018402
Coordinates   1405881..1406477 (+) Length   198 a.a.
NCBI ID   WP_012117447.1    Uniprot ID   -
Organism   Bacillus velezensis strain S141     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1400881..1411477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVS141_RS07355 (BVS141_14640) - 1401093..1401548 (+) 456 WP_060561754.1 flavodoxin -
  BVS141_RS07360 (BVS141_14650) dapD 1401630..1402340 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BVS141_RS07365 (BVS141_14660) - 1402411..1403535 (+) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  BVS141_RS07370 (BVS141_14670) - 1403596..1403841 (+) 246 WP_003154596.1 YkuS family protein -
  BVS141_RS07375 (BVS141_14680) - 1403875..1404681 (-) 807 WP_060561753.1 mechanosensitive ion channel family protein -
  BVS141_RS07380 (BVS141_14690) - 1404970..1405428 (+) 459 WP_060561752.1 TlpA disulfide reductase family protein -
  BVS141_RS07385 (BVS141_14700) rok 1405881..1406477 (+) 597 WP_012117447.1 transcriptional regulator Rok Regulator
  BVS141_RS07390 (BVS141_14710) - 1406501..1407493 (-) 993 WP_043021218.1 hypothetical protein -
  BVS141_RS07395 (BVS141_14720) - 1407639..1408241 (+) 603 WP_020955749.1 molybdenum cofactor guanylyltransferase -
  BVS141_RS07400 (BVS141_14730) - 1408293..1409312 (+) 1020 WP_060561751.1 molybdopterin-synthase adenylyltransferase MoeB -
  BVS141_RS07405 (BVS141_14740) glp 1409330..1410622 (+) 1293 WP_060561750.1 gephyrin-like molybdotransferase Glp -
  BVS141_RS07410 (BVS141_14750) mobB 1410583..1411104 (+) 522 WP_007409631.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22495.54 Da        Isoelectric Point: 9.6909

>NTDB_id=69502 BVS141_RS07385 WP_012117447.1 1405881..1406477(+) (rok) [Bacillus velezensis strain S141]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
AQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=69502 BVS141_RS07385 WP_012117447.1 1405881..1406477(+) (rok) [Bacillus velezensis strain S141]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
GCACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATTAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment