Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   BVS141_RS05855 Genome accession   NZ_AP018402
Coordinates   1128042..1128233 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain S141     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123042..1133233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVS141_RS05820 (BVS141_11580) argF 1123894..1124865 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  BVS141_RS05825 (BVS141_11590) - 1124941..1125120 (+) 180 WP_003155070.1 YjzC family protein -
  BVS141_RS05830 (BVS141_11600) - 1125157..1125342 (-) 186 WP_007409129.1 YjzD family protein -
  BVS141_RS05840 (BVS141_11610) - 1125603..1126337 (+) 735 WP_060562151.1 hypothetical protein -
  BVS141_RS05845 (BVS141_11620) - 1126420..1126986 (+) 567 WP_017417444.1 hypothetical protein -
  BVS141_RS05850 (BVS141_11630) med 1127076..1128029 (+) 954 WP_060562152.1 BMP family ABC transporter substrate-binding protein Regulator
  BVS141_RS05855 (BVS141_11640) comZ 1128042..1128233 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BVS141_RS05860 (BVS141_11650) - 1128262..1128480 (-) 219 WP_007409123.1 hypothetical protein -
  BVS141_RS05865 (BVS141_11660) - 1128647..1129585 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BVS141_RS05870 (BVS141_11670) fabF 1129608..1130846 (+) 1239 WP_060562153.1 beta-ketoacyl-ACP synthase II -
  BVS141_RS05875 (BVS141_11680) - 1130930..1131715 (+) 786 WP_060562154.1 DUF2268 domain-containing protein -
  BVS141_RS05880 (BVS141_11690) - 1131889..1132875 (+) 987 WP_033574515.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=69494 BVS141_RS05855 WP_003155061.1 1128042..1128233(+) (comZ) [Bacillus velezensis strain S141]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=69494 BVS141_RS05855 WP_003155061.1 1128042..1128233(+) (comZ) [Bacillus velezensis strain S141]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACTTCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment