Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   NAF01_RS05725 Genome accession   NZ_CP098323
Coordinates   1091294..1092097 (+) Length   267 a.a.
NCBI ID   WP_250801950.1    Uniprot ID   -
Organism   Cytobacillus firmus strain PheN7     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 1086294..1097097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NAF01_RS05695 (NAF01_05695) - 1087113..1087781 (-) 669 WP_226619348.1 VWA domain-containing protein -
  NAF01_RS05700 (NAF01_05700) - 1087856..1088917 (-) 1062 WP_197214459.1 M20/M25/M40 family metallo-hydrolase -
  NAF01_RS05705 (NAF01_05705) - 1089243..1089746 (+) 504 WP_226619717.1 DoxX family protein -
  NAF01_RS05710 (NAF01_05710) - 1089802..1089990 (-) 189 WP_048011767.1 YfhD family protein -
  NAF01_RS05715 (NAF01_05715) - 1090084..1090209 (-) 126 WP_226619347.1 YfhE family protein -
  NAF01_RS05720 (NAF01_05720) - 1090284..1091189 (-) 906 WP_197214460.1 TIGR01777 family oxidoreductase -
  NAF01_RS05725 (NAF01_05725) recX 1091294..1092097 (+) 804 WP_250801950.1 recombination regulator RecX Regulator
  NAF01_RS05730 (NAF01_05730) - 1092117..1092788 (-) 672 WP_226619346.1 SDR family oxidoreductase -
  NAF01_RS05735 (NAF01_05735) - 1092966..1093295 (+) 330 WP_226619345.1 YfhH family protein -
  NAF01_RS05740 (NAF01_05740) - 1093355..1093513 (-) 159 WP_009335831.1 YpzG family protein -
  NAF01_RS05745 (NAF01_05745) - 1093533..1093703 (-) 171 WP_048011772.1 small, acid-soluble spore protein K -
  NAF01_RS05750 (NAF01_05750) - 1093831..1094100 (+) 270 WP_048011773.1 YfhJ family protein -
  NAF01_RS05755 (NAF01_05755) - 1094134..1095114 (-) 981 WP_197214465.1 metal-dependent hydrolase -
  NAF01_RS05760 (NAF01_05760) mutY 1095321..1096415 (+) 1095 WP_222498695.1 A/G-specific adenine glycosylase -
  NAF01_RS05765 (NAF01_05765) - 1096455..1096679 (-) 225 WP_048011776.1 hypothetical protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 31654.08 Da        Isoelectric Point: 5.2339

>NTDB_id=694889 NAF01_RS05725 WP_250801950.1 1091294..1092097(+) (recX) [Cytobacillus firmus strain PheN7]
MPTITKITVQKKNTDRYNIYMDYGKGEEYAFSVDEDVLIKHQLKKGMELDEFSLNEIGYQDDIRKAYNRAIHYLSRRMRS
ETEVRKHLAEKEVEEPVIQEVIHKLYDYHFLNDEEFAAAFVRTQMNTSDKGKGLIRTELKEKGISPQLIEMALEEYQRDA
ELAAAIRLCEKYSKKYARDSSKILKQKLEQMLMRKGFNFDIIQEAVTETEIDKEEDEELAALRFQAEKAKKKYANLPEFE
YMQKMKQALFRKGFSFDLIEQFLSEEE

Nucleotide


Download         Length: 804 bp        

>NTDB_id=694889 NAF01_RS05725 WP_250801950.1 1091294..1092097(+) (recX) [Cytobacillus firmus strain PheN7]
ATGCCGACTATTACTAAAATCACAGTTCAGAAAAAAAACACAGACCGCTACAATATATATATGGATTATGGGAAAGGTGA
AGAATATGCATTTAGTGTGGATGAAGATGTTTTAATTAAGCATCAGCTAAAAAAGGGAATGGAGCTTGATGAATTCTCTT
TAAATGAAATTGGCTATCAGGATGATATCCGGAAAGCCTATAACAGGGCTATTCATTATTTATCCAGAAGAATGCGCTCA
GAAACCGAAGTCCGCAAACATTTAGCTGAAAAAGAAGTGGAAGAACCGGTTATTCAGGAAGTTATCCACAAATTGTATGA
TTACCATTTTTTAAATGATGAAGAATTTGCAGCAGCTTTTGTGCGTACACAAATGAACACATCAGATAAAGGTAAAGGCC
TGATCCGCACAGAACTAAAGGAAAAAGGGATTTCCCCTCAATTAATCGAAATGGCATTGGAGGAATATCAAAGGGATGCT
GAGTTAGCTGCCGCTATAAGGCTGTGTGAAAAATATTCAAAGAAATATGCTCGTGATTCATCCAAAATCCTTAAGCAAAA
GCTGGAACAGATGTTAATGCGTAAAGGCTTTAATTTCGACATCATTCAAGAAGCTGTAACTGAAACGGAGATTGATAAAG
AAGAGGATGAAGAACTGGCTGCCCTGAGGTTCCAGGCGGAAAAAGCGAAGAAGAAATATGCAAACCTTCCTGAGTTCGAA
TATATGCAAAAAATGAAGCAAGCCTTGTTCAGAAAAGGTTTTTCTTTTGATTTGATAGAGCAATTTTTAAGTGAAGAAGA
ATAA

Domains


Predicted by InterproScan.

(88-208)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

50.562

100

0.506