Detailed information
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | NAL90_RS12150 | Genome accession | NZ_CP098321 |
| Coordinates | 2780004..2781380 (-) | Length | 458 a.a. |
| NCBI ID | WP_013698533.1 | Uniprot ID | A0AB38TL25 |
| Organism | Burkholderia gladioli strain BK04 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2775004..2786380
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NAL90_RS12130 (NAL90_12125) | cls | 2775398..2776837 (+) | 1440 | WP_036050854.1 | cardiolipin synthase | - |
| NAL90_RS12135 (NAL90_12130) | - | 2776869..2777354 (-) | 486 | WP_013698530.1 | glutathione peroxidase | - |
| NAL90_RS12140 (NAL90_12135) | - | 2777544..2779469 (+) | 1926 | WP_186018278.1 | ATP-binding cassette domain-containing protein | - |
| NAL90_RS12145 (NAL90_12140) | - | 2779609..2779872 (-) | 264 | WP_013698532.1 | DUF2866 domain-containing protein | - |
| NAL90_RS12150 (NAL90_12145) | radA | 2780004..2781380 (-) | 1377 | WP_013698533.1 | DNA repair protein RadA | Machinery gene |
| NAL90_RS12155 (NAL90_12150) | alr | 2781391..2782461 (-) | 1071 | WP_013698534.1 | alanine racemase | - |
| NAL90_RS12160 (NAL90_12155) | lplT | 2782673..2783980 (+) | 1308 | WP_060003371.1 | lysophospholipid transporter LplT | - |
| NAL90_RS12165 (NAL90_12160) | thiD | 2784081..2784893 (+) | 813 | WP_036050843.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| NAL90_RS12170 (NAL90_12165) | - | 2784974..2785927 (-) | 954 | WP_036050840.1 | DUF1853 family protein | - |
Sequence
Protein
Download Length: 458 a.a. Molecular weight: 48728.15 Da Isoelectric Point: 7.2038
>NTDB_id=694873 NAL90_RS12150 WP_013698533.1 2780004..2781380(-) (radA) [Burkholderia gladioli strain BK04]
MAKQKTVYICTECGGQSLKWQGQCPSCHAWNTLVESAAETPSQHRFQALAKSAPVQRLADIDAADVPRFSTGIGEFDRVL
GGGLVAGGVVLIGGDPGIGKSTLLLQSLAQLASQRRALYISGEESAAQIALRAQRLALLDHGGDAADLKLLAEIQLEKIQ
ATIAAERPDVAVIDSIQTVYSEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGALAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAFKNRFGAVNELGVFAMTERGLRGVSNPSALFLSQHEEVVPGSCVLVTQEGSRPLLVEVQALVDTANV
PNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLA
GEIRPSPRGQERLREAAKLGFTIALIPKANAPKQPIEGLTVMAVERIEQAIDRVRGLE
MAKQKTVYICTECGGQSLKWQGQCPSCHAWNTLVESAAETPSQHRFQALAKSAPVQRLADIDAADVPRFSTGIGEFDRVL
GGGLVAGGVVLIGGDPGIGKSTLLLQSLAQLASQRRALYISGEESAAQIALRAQRLALLDHGGDAADLKLLAEIQLEKIQ
ATIAAERPDVAVIDSIQTVYSEALTSAPGSVAQVRECAAQLTRIAKQSGTAIIMVGHVTKEGALAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAFKNRFGAVNELGVFAMTERGLRGVSNPSALFLSQHEEVVPGSCVLVTQEGSRPLLVEVQALVDTANV
PNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFLNAVGGVKITEPAADLAVLLAIHSSMRNKALPKGLIVFGEVGLA
GEIRPSPRGQERLREAAKLGFTIALIPKANAPKQPIEGLTVMAVERIEQAIDRVRGLE
Nucleotide
Download Length: 1377 bp
>NTDB_id=694873 NAL90_RS12150 WP_013698533.1 2780004..2781380(-) (radA) [Burkholderia gladioli strain BK04]
GTGGCGAAACAGAAAACCGTCTATATCTGCACCGAATGCGGCGGCCAGTCGCTGAAATGGCAGGGCCAGTGCCCGTCCTG
CCATGCCTGGAACACGCTGGTCGAATCGGCCGCCGAAACCCCTTCGCAGCACCGCTTCCAGGCGCTCGCCAAGAGCGCGC
CGGTGCAGCGCCTGGCCGATATCGACGCGGCCGACGTGCCGCGCTTTTCCACCGGCATCGGCGAGTTCGACCGCGTGCTC
GGCGGCGGCCTGGTGGCCGGCGGCGTGGTGCTGATCGGCGGCGACCCCGGCATCGGTAAATCCACCCTGTTGCTGCAGTC
GCTGGCCCAGCTGGCCAGCCAGCGCCGCGCGCTCTATATCAGCGGCGAGGAATCGGCCGCCCAGATCGCCCTGCGCGCCC
AGCGCCTGGCCCTGCTCGATCACGGCGGCGACGCCGCCGATCTCAAGCTGCTGGCGGAAATCCAGCTCGAGAAGATCCAG
GCCACGATCGCCGCCGAGCGGCCCGACGTGGCCGTGATCGACTCGATCCAGACCGTCTATTCGGAAGCGCTCACCTCGGC
GCCCGGCTCGGTGGCCCAGGTGCGCGAATGCGCGGCCCAGCTCACGCGCATCGCCAAGCAGTCGGGCACCGCGATCATCA
TGGTTGGCCACGTCACCAAGGAGGGGGCGCTGGCGGGCCCGCGCGTGCTGGAGCACATCGTCGACACGGTGCTGTACTTC
GAGGGCGACACGCATTCTTCCTACCGGCTGGTGCGGGCCTTCAAGAACCGCTTCGGCGCGGTCAACGAGCTCGGGGTGTT
CGCCATGACCGAGCGCGGCCTGCGCGGCGTGTCCAATCCGTCCGCGCTGTTCCTCTCGCAGCACGAGGAGGTGGTGCCGG
GTTCCTGCGTGCTGGTCACGCAGGAGGGCTCGCGGCCGCTGCTGGTGGAGGTGCAGGCGCTGGTCGACACCGCCAACGTG
CCGAATCCGCGGCGCCTGGCGGTGGGCCTGGAGCAGAACCGGCTGGCCATGCTGCTGGCCGTGCTGCATCGCCATGCGGG
CATCGCCTGCTTCGACCAGGACGTGTTCCTGAACGCGGTGGGGGGCGTCAAGATTACCGAGCCGGCCGCCGACCTGGCGG
TGCTGCTGGCGATCCATTCGTCGATGCGTAACAAAGCGTTGCCGAAGGGCCTGATCGTGTTCGGCGAGGTCGGGCTGGCC
GGCGAGATCCGGCCTTCGCCGCGCGGCCAGGAGCGTCTGCGCGAGGCGGCCAAGCTGGGTTTCACGATCGCGCTGATTCC
CAAGGCCAATGCGCCCAAGCAGCCGATCGAGGGGCTCACCGTGATGGCCGTCGAGCGCATCGAGCAGGCCATCGACCGCG
TGCGCGGCCTCGAATGA
GTGGCGAAACAGAAAACCGTCTATATCTGCACCGAATGCGGCGGCCAGTCGCTGAAATGGCAGGGCCAGTGCCCGTCCTG
CCATGCCTGGAACACGCTGGTCGAATCGGCCGCCGAAACCCCTTCGCAGCACCGCTTCCAGGCGCTCGCCAAGAGCGCGC
CGGTGCAGCGCCTGGCCGATATCGACGCGGCCGACGTGCCGCGCTTTTCCACCGGCATCGGCGAGTTCGACCGCGTGCTC
GGCGGCGGCCTGGTGGCCGGCGGCGTGGTGCTGATCGGCGGCGACCCCGGCATCGGTAAATCCACCCTGTTGCTGCAGTC
GCTGGCCCAGCTGGCCAGCCAGCGCCGCGCGCTCTATATCAGCGGCGAGGAATCGGCCGCCCAGATCGCCCTGCGCGCCC
AGCGCCTGGCCCTGCTCGATCACGGCGGCGACGCCGCCGATCTCAAGCTGCTGGCGGAAATCCAGCTCGAGAAGATCCAG
GCCACGATCGCCGCCGAGCGGCCCGACGTGGCCGTGATCGACTCGATCCAGACCGTCTATTCGGAAGCGCTCACCTCGGC
GCCCGGCTCGGTGGCCCAGGTGCGCGAATGCGCGGCCCAGCTCACGCGCATCGCCAAGCAGTCGGGCACCGCGATCATCA
TGGTTGGCCACGTCACCAAGGAGGGGGCGCTGGCGGGCCCGCGCGTGCTGGAGCACATCGTCGACACGGTGCTGTACTTC
GAGGGCGACACGCATTCTTCCTACCGGCTGGTGCGGGCCTTCAAGAACCGCTTCGGCGCGGTCAACGAGCTCGGGGTGTT
CGCCATGACCGAGCGCGGCCTGCGCGGCGTGTCCAATCCGTCCGCGCTGTTCCTCTCGCAGCACGAGGAGGTGGTGCCGG
GTTCCTGCGTGCTGGTCACGCAGGAGGGCTCGCGGCCGCTGCTGGTGGAGGTGCAGGCGCTGGTCGACACCGCCAACGTG
CCGAATCCGCGGCGCCTGGCGGTGGGCCTGGAGCAGAACCGGCTGGCCATGCTGCTGGCCGTGCTGCATCGCCATGCGGG
CATCGCCTGCTTCGACCAGGACGTGTTCCTGAACGCGGTGGGGGGCGTCAAGATTACCGAGCCGGCCGCCGACCTGGCGG
TGCTGCTGGCGATCCATTCGTCGATGCGTAACAAAGCGTTGCCGAAGGGCCTGATCGTGTTCGGCGAGGTCGGGCTGGCC
GGCGAGATCCGGCCTTCGCCGCGCGGCCAGGAGCGTCTGCGCGAGGCGGCCAAGCTGGGTTTCACGATCGCGCTGATTCC
CAAGGCCAATGCGCCCAAGCAGCCGATCGAGGGGCTCACCGTGATGGCCGTCGAGCGCATCGAGCAGGCCATCGACCGCG
TGCGCGGCCTCGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Bacillus subtilis subsp. subtilis str. 168 |
48.707 |
100 |
0.493 |
| radA | Streptococcus pneumoniae Rx1 |
46.32 |
100 |
0.467 |
| radA | Streptococcus pneumoniae D39 |
46.32 |
100 |
0.467 |
| radA | Streptococcus pneumoniae R6 |
46.32 |
100 |
0.467 |
| radA | Streptococcus pneumoniae TIGR4 |
46.32 |
100 |
0.467 |
| radA | Streptococcus mitis SK321 |
46.507 |
100 |
0.465 |
| radA | Streptococcus mitis NCTC 12261 |
46.171 |
99.782 |
0.461 |