Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BVS141_RS00255 | Genome accession | NZ_AP018402 |
| Coordinates | 45965..46255 (-) | Length | 96 a.a. |
| NCBI ID | WP_169510469.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain S141 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 40965..51255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVS141_RS00215 (BVS141_00430) | darA | 40982..41311 (+) | 330 | WP_004264734.1 | cyclic di-AMP receptor DarA | - |
| BVS141_RS00220 (BVS141_00440) | - | 41324..41764 (+) | 441 | WP_004264730.1 | YaaR family protein | - |
| BVS141_RS00225 (BVS141_00450) | holB | 41776..42765 (+) | 990 | WP_007409919.1 | DNA polymerase III subunit delta' | - |
| BVS141_RS00230 (BVS141_00460) | ricT | 42768..43595 (+) | 828 | WP_004264723.1 | competence/sporulation regulator complex protein RicT | - |
| BVS141_RS00235 (BVS141_00470) | yabA | 43610..43969 (+) | 360 | WP_004264720.1 | replication initiation-control protein YabA | - |
| BVS141_RS00240 (BVS141_00480) | - | 44030..44773 (+) | 744 | WP_004264717.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BVS141_RS00245 (BVS141_00490) | - | 44760..45059 (+) | 300 | WP_060561981.1 | GIY-YIG nuclease family protein | - |
| BVS141_RS00250 (BVS141_00500) | rsmI | 45034..45915 (+) | 882 | WP_060561980.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BVS141_RS00255 (BVS141_00510) | abrB | 45965..46255 (-) | 291 | WP_169510469.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BVS141_RS00260 (BVS141_00520) | metG | 46739..48730 (+) | 1992 | WP_060561979.1 | methionine--tRNA ligase | - |
| BVS141_RS00265 (BVS141_00530) | - | 48806..49573 (+) | 768 | WP_029326250.1 | TatD family hydrolase | - |
| BVS141_RS00270 (BVS141_00540) | - | 49708..51033 (+) | 1326 | WP_023356663.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10753.57 Da Isoelectric Point: 6.3482
>NTDB_id=69475 BVS141_RS00255 WP_169510469.1 45965..46255(-) (abrB) [Bacillus velezensis strain S141]
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
MLMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNQK
Nucleotide
Download Length: 291 bp
>NTDB_id=69475 BVS141_RS00255 WP_169510469.1 45965..46255(-) (abrB) [Bacillus velezensis strain S141]
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
CTGTTAATGAAATCTACTGGTATCGTACGTAAAGTTGATGAACTTGGACGCGTCGTTATCCCTATCGAACTTCGCCGTAC
ACTGGGCATCGCAGAAAAAGACGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTCAGCAAAGAAGGC
GCTGAGCAAATCATCTCTGAAATTCAAAACCAGCTTCAAAACCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
97.917 |
100 |
0.979 |