Detailed information NTG0694741

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NB647_RS10225
• Genome accession: NZ_CP098252
• Coordinates: 2230782..2231846 (+)
• Length: 354 a.a.
• NCBI ID: WP_269283413.1
• Uniprot ID: -
• Organism: Oxalobacter aliiformigenes strain Va3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2225782..2236846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NB647_RS10200 (NB647_10150)	-	2226443..2226694 (-)	252	WP_269264465.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NB647_RS10205 (NB647_10155)	coaD	2226744..2227235 (-)	492	WP_269264466.1	pantetheine-phosphate adenylyltransferase	-
NB647_RS10210 (NB647_10160)	rsmD	2227275..2227922 (-)	648	WP_269283409.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NB647_RS10215 (NB647_10165)	-	2227966..2229315 (-)	1350	WP_269283411.1	M16 family metallopeptidase	-
NB647_RS10220 (NB647_10170)	-	2229355..2230701 (-)	1347	WP_269264469.1	M16 family metallopeptidase	-
NB647_RS10225 (NB647_10175)	pilA	2230782..2231846 (+)	1065	WP_269283413.1	signal recognition particle-docking protein FtsY	Machinery gene
NB647_RS10230 (NB647_10180)	-	2231858..2232547 (+)	690	WP_269265875.1	cell division ATP-binding protein FtsE	-
NB647_RS10235 (NB647_10185)	-	2232531..2233463 (+)	933	WP_269283415.1	cell division protein FtsX	-
NB647_RS10240 (NB647_10190)	rpoH	2233686..2234585 (+)	900	WP_269264472.1	RNA polymerase sigma factor RpoH	-
NB647_RS10245 (NB647_10195)	-	2234615..2235445 (-)	831	WP_269283417.1	methyltransferase domain-containing protein	-
NB647_RS10250 (NB647_10200)	-	2235548..2236297 (+)	750	WP_269264474.1	ComF family protein	-
NB647_RS10255 (NB647_10205)	trmL	2236318..2236788 (+)	471	WP_269264475.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38215.84 Da
• Isoelectric Point: 5.7082

>NTDB_id=694741 NB647_RS10225 WP_269283413.1 2230782..2231846(+) (pilA) [Oxalobacter aliiformigenes strain Va3]
MFSFFKKKTDVTKTKEEISKPVLSDDTHETSAISESSAPDAANIETSQAIAKPEEEKKQSWLTRLKAGLARTSANLNIFG
GTKIDEELFEELETALLVSDVGLPATEYLLDTLRKKVREEHLTQPSEIKAELAKLLTGLLAPLQKSLEIGRHSPLIVMMT
GVNGAGKTTTIGKLARHLQNNNQTVLLAAGDTFRAAAREQLAVWGNRNQITVIAQESGDPAAVAFDAVQSAKAKNIDVVM
VDTAGRLPTQLHLMEELRKIKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTPKGGILAAI
AKNHPVPVYFIGVGEKIEDLQPFVAEEFSNALLS

Nucleotide

• Length: 1065 bp

>NTDB_id=694741 NB647_RS10225 WP_269283413.1 2230782..2231846(+) (pilA) [Oxalobacter aliiformigenes strain Va3]
ATGTTCAGCTTTTTCAAAAAGAAAACCGACGTCACCAAGACAAAAGAAGAAATCAGCAAACCGGTCTTGTCAGACGACAC
ACATGAAACATCCGCTATTTCGGAGTCGTCTGCACCTGATGCTGCCAATATAGAGACTTCCCAGGCCATTGCCAAGCCGG
AAGAAGAAAAAAAACAGTCCTGGCTGACTCGTCTCAAAGCAGGGCTCGCCAGAACTTCCGCCAATCTGAATATTTTTGGT
GGAACGAAAATCGATGAAGAACTGTTTGAAGAACTCGAAACGGCTCTTCTCGTTTCCGATGTGGGACTTCCTGCCACGGA
ATATCTTCTGGATACCCTTCGAAAAAAAGTCAGGGAAGAACATTTGACGCAACCTTCGGAAATCAAGGCCGAACTGGCCA
AATTGTTGACAGGACTATTAGCCCCTCTTCAGAAAAGTCTTGAAATAGGAAGGCATTCTCCCTTAATTGTCATGATGACG
GGAGTAAACGGTGCCGGCAAAACGACAACAATCGGTAAACTCGCCAGACATCTCCAGAACAACAACCAGACCGTCCTGCT
GGCAGCAGGCGATACTTTCCGCGCAGCGGCACGTGAACAGCTTGCAGTCTGGGGGAATCGGAACCAGATCACCGTCATTG
CCCAGGAATCCGGCGATCCGGCAGCTGTCGCTTTCGATGCAGTCCAGTCAGCCAAAGCGAAAAATATCGACGTCGTTATG
GTGGACACGGCAGGCCGCTTGCCGACCCAACTACACCTAATGGAAGAACTCAGGAAAATCAAACGGGTCATCGGAAAAGG
AATGGATGAAGCGCCTCATGAAATCATACTTGTCATCGATGGCAACACCGGACAGAATGCACTTGCCCAGGTCAAGGCAT
TTGACGAGGCACTGGGACTGACCGGTCTGATCGTTACCAAGCTGGATGGCACACCCAAAGGAGGCATTCTTGCGGCAATC
GCGAAAAATCATCCTGTTCCCGTCTATTTCATTGGCGTAGGTGAAAAAATCGAAGACCTCCAGCCGTTTGTTGCGGAAGA
ATTCTCCAATGCGTTGCTGAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (77-132)

• SRP54-type protein, GTPase domain (SRP54) (155-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.361	86.158	0.503