Detailed information NTG0694690

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NB645_RS09410
• Genome accession: NZ_CP098248
• Coordinates: 2056246..2057310 (+)
• Length: 354 a.a.
• NCBI ID: WP_269264470.1
• Uniprot ID: -
• Organism: Oxalobacter aliiformigenes strain HOxNP-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2051246..2062310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NB645_RS09385 (NB645_09360)	-	2051907..2052158 (-)	252	WP_269264465.1	YfhL family 4Fe-4S dicluster ferredoxin	-
NB645_RS09390 (NB645_09365)	coaD	2052208..2052699 (-)	492	WP_269264466.1	pantetheine-phosphate adenylyltransferase	-
NB645_RS09395 (NB645_09370)	rsmD	2052739..2053350 (-)	612	WP_332880115.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NB645_RS09400 (NB645_09375)	-	2053430..2054779 (-)	1350	WP_269264468.1	M16 family metallopeptidase	-
NB645_RS09405 (NB645_09380)	-	2054819..2056165 (-)	1347	WP_269264469.1	M16 family metallopeptidase	-
NB645_RS09410 (NB645_09385)	pilA	2056246..2057310 (+)	1065	WP_269264470.1	signal recognition particle-docking protein FtsY	Machinery gene
NB645_RS09415 (NB645_09390)	-	2057322..2058011 (+)	690	WP_269265875.1	cell division ATP-binding protein FtsE	-
NB645_RS09420 (NB645_09395)	-	2057995..2058927 (+)	933	WP_269264471.1	cell division protein FtsX	-
NB645_RS09425 (NB645_09400)	rpoH	2059151..2060050 (+)	900	WP_269264472.1	RNA polymerase sigma factor RpoH	-
NB645_RS09430 (NB645_09405)	-	2060080..2060910 (-)	831	WP_269264473.1	methyltransferase domain-containing protein	-
NB645_RS09435 (NB645_09410)	-	2061013..2061762 (+)	750	WP_269264474.1	ComF family protein	-
NB645_RS09440 (NB645_09415)	trmL	2061783..2062253 (+)	471	WP_269264475.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38243.85 Da
• Isoelectric Point: 5.7082

>NTDB_id=694690 NB645_RS09410 WP_269264470.1 2056246..2057310(+) (pilA) [Oxalobacter aliiformigenes strain HOxNP-1]
MFSFFKKKTDVTKTKEEISKPVLSDDTHETSAISESSAPDAANIETSQAIAKPEEEKKQSWLTRLKAGLARTSANLNIFG
GTKIDEELFEELETALLVSDVGLPATEYLLDTLRKKVREEHLTQPSEIKAELAKLLTGLLAPLQKSLEIGRHSPLIVMMT
GVNGAGKTTTIGKLARHLQNNNQTVLLAAGDTFRAAAREQLAVWGNRNQITVIAQESGDPAAVAFDAVQSAKARNIDVVM
VDTAGRLPTQLHLMEELRKIKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTPKGGILAAI
AKNHPVPVYFIGVGEKIEDLQPFVAEEFSNALLS

Nucleotide

• Length: 1065 bp

>NTDB_id=694690 NB645_RS09410 WP_269264470.1 2056246..2057310(+) (pilA) [Oxalobacter aliiformigenes strain HOxNP-1]
ATGTTCAGCTTTTTCAAAAAGAAAACCGACGTCACCAAGACAAAAGAAGAAATCAGCAAACCGGTCTTGTCAGACGACAC
ACATGAAACATCCGCTATTTCGGAGTCGTCTGCACCTGATGCTGCCAATATAGAGACTTCCCAGGCCATTGCCAAGCCGG
AAGAAGAAAAAAAACAGTCCTGGCTGACTCGTCTCAAAGCAGGGCTCGCCAGAACTTCCGCCAATCTGAATATTTTTGGT
GGAACGAAAATCGATGAAGAACTGTTTGAAGAACTCGAAACGGCTCTTCTCGTTTCCGATGTGGGACTTCCTGCCACGGA
ATATCTTCTGGATACCCTTCGAAAAAAAGTCAGGGAAGAACATTTGACGCAACCTTCGGAAATCAAGGCCGAACTGGCCA
AATTGTTGACAGGACTATTAGCCCCTCTTCAGAAAAGTCTTGAAATAGGAAGGCATTCTCCCTTAATTGTCATGATGACG
GGAGTAAACGGTGCCGGCAAAACGACAACAATCGGTAAACTCGCCAGACATCTCCAGAACAACAACCAGACCGTCCTGCT
GGCAGCAGGCGATACTTTCCGCGCAGCGGCACGTGAACAGCTTGCAGTCTGGGGGAATCGGAACCAGATCACCGTCATTG
CCCAGGAATCCGGCGATCCGGCAGCTGTCGCTTTCGATGCAGTCCAGTCAGCCAAAGCGAGAAATATCGACGTCGTTATG
GTGGACACGGCAGGCCGCTTGCCGACCCAACTACACCTGATGGAAGAACTCAGGAAAATCAAACGGGTCATCGGAAAAGG
AATGGATGAAGCGCCTCATGAAATCATACTTGTCATCGATGGCAACACCGGACAGAATGCACTTGCCCAGGTCAAGGCAT
TTGACGAGGCACTGGGACTGACCGGTCTGATCGTTACCAAGCTGGATGGCACACCCAAAGGAGGCATTCTTGCGGCAATC
GCGAAAAATCATCCTGTTCCCGTCTATTTCATTGGCGTAGGTGAAAAAATCGAAGACCTCCAGCCGTTTGTTGCGGAAGA
ATTCTCCAATGCGTTGCTGAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (77-132)

• SRP54-type protein, GTPase domain (SRP54) (155-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.689	86.158	0.506