Detailed information NTG0694677

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NB636_RS11230
• Genome accession: NZ_CP098247
• Coordinates: 2304009..2305073 (-)
• Length: 354 a.a.
• NCBI ID: WP_269278741.1
• Uniprot ID: -
• Organism: Oxalobacter aliiformigenes strain BA2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2299009..2310073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NB636_RS11200 (NB636_11165)	trmL	2299064..2299534 (-)	471	WP_269278753.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
NB636_RS11205 (NB636_11170)	-	2299555..2300304 (-)	750	WP_269278750.1	ComF family protein	-
NB636_RS11210 (NB636_11175)	-	2300408..2301238 (+)	831	WP_269278747.1	methyltransferase domain-containing protein	-
NB636_RS11215 (NB636_11180)	rpoH	2301268..2302167 (-)	900	WP_269264472.1	RNA polymerase sigma factor RpoH	-
NB636_RS11220 (NB636_11185)	-	2302390..2303220 (-)	831	WP_332879966.1	cell division protein FtsX	-
NB636_RS11225 (NB636_11190)	-	2303305..2303997 (-)	693	WP_269278968.1	cell division ATP-binding protein FtsE	-
NB636_RS11230 (NB636_11195)	pilA	2304009..2305073 (-)	1065	WP_269278741.1	signal recognition particle-docking protein FtsY	Machinery gene
NB636_RS11235 (NB636_11200)	-	2305154..2306500 (+)	1347	WP_269278738.1	M16 family metallopeptidase	-
NB636_RS11240 (NB636_11205)	-	2306540..2307889 (+)	1350	WP_269278735.1	M16 family metallopeptidase	-
NB636_RS11245 (NB636_11210)	rsmD	2307933..2308580 (+)	648	WP_269278733.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NB636_RS11250 (NB636_11215)	coaD	2308620..2309111 (+)	492	WP_269264466.1	pantetheine-phosphate adenylyltransferase	-
NB636_RS11255 (NB636_11220)	-	2309161..2309412 (+)	252	WP_269278730.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38276.92 Da
• Isoelectric Point: 5.4910

>NTDB_id=694677 NB636_RS11230 WP_269278741.1 2304009..2305073(-) (pilA) [Oxalobacter aliiformigenes strain BA2]
MFSFFKKKTDVAKTKEEISKPVLSDDTHETSAISESFAPDATNIETSQAIAKPEEEKKQSWLTRLKAGLARTSANLNIFG
GTKIDEELFEELETALLVSDVGLPATEYLLDALRKKVREEHLTQPSEIKAELAKLLTGLLTPLQKSLEIGRHSPLIVMMT
GVNGAGKTTTIGKLARHLQNNNQTVLLAAGDTFRAAAREQLAVWGDRNQITVIAQESGDPAAVAFDAVQSAKAKNIDVVM
VDTAGRLPTQLHLMEELRKIKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDEALGLTGLIVTKLDGTPKGGILAAI
AKNHPVPVYFIGVGEKIEDLQPFVAEEFSNALLS

Nucleotide

• Length: 1065 bp

>NTDB_id=694677 NB636_RS11230 WP_269278741.1 2304009..2305073(-) (pilA) [Oxalobacter aliiformigenes strain BA2]
ATGTTCAGCTTTTTCAAAAAGAAAACCGACGTCGCCAAGACAAAAGAAGAAATCAGCAAACCGGTCTTGTCAGACGACAC
ACATGAAACATCCGCTATTTCGGAGTCGTTTGCACCTGATGCTACCAATATAGAGACTTCCCAAGCCATTGCCAAGCCGG
AAGAAGAAAAAAAACAGTCCTGGCTGACTCGTCTCAAGGCAGGGCTCGCCAGAACTTCCGCCAATCTGAATATTTTTGGT
GGAACGAAAATCGATGAAGAACTGTTTGAAGAACTCGAAACGGCTCTTCTCGTTTCCGATGTGGGACTTCCTGCCACGGA
ATATCTTCTGGATGCCCTTCGAAAAAAAGTCAGGGAAGAACATTTGACGCAACCTTCGGAAATCAAGGCCGAACTGGCCA
AACTGTTGACAGGACTGTTAACCCCCCTTCAGAAAAGTCTTGAAATAGGAAGGCATTCTCCCTTAATTGTCATGATGACG
GGAGTAAACGGTGCCGGCAAAACGACAACAATCGGAAAACTCGCCAGACATCTCCAGAACAACAACCAGACCGTCCTGCT
GGCAGCAGGCGATACCTTCCGCGCAGCGGCACGTGAACAACTTGCAGTCTGGGGGGATAGGAACCAGATCACCGTCATTG
CCCAGGAATCCGGTGATCCGGCAGCTGTCGCTTTCGATGCAGTCCAGTCAGCCAAAGCGAAAAATATCGACGTCGTTATG
GTGGACACGGCCGGCCGCTTGCCGACCCAGTTACACCTGATGGAAGAACTCAGGAAAATCAAACGGGTCATCGGAAAAGG
AATGGATGAAGCACCTCATGAAATCATACTTGTCATCGATGGCAATACCGGACAGAATGCACTTGCCCAGGTCAAGGCAT
TTGACGAGGCACTGGGGCTGACCGGTCTGATCGTTACCAAGCTGGATGGCACACCCAAAGGAGGCATTCTTGCGGCAATC
GCGAAAAATCATCCTGTTCCCGTCTATTTCATTGGCGTAGGTGAAAAAATCGAAGACCTCCAGCCGTTTGTTGCGGAAGA
ATTCTCCAATGCGTTGCTGAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (77-132)

• SRP54-type protein, GTPase domain (SRP54) (155-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.361	86.158	0.503