Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | NB644_RS00070 | Genome accession | NZ_CP098246 |
| Coordinates | 12919..13974 (+) | Length | 351 a.a. |
| NCBI ID | WP_005882714.1 | Uniprot ID | C3XCV6 |
| Organism | Oxalobacter formigenes strain HOxSLD-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 7919..18974
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NB644_RS00045 (NB644_00045) | - | 8603..8851 (-) | 249 | WP_005882726.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| NB644_RS00050 (NB644_00050) | coaD | 8911..9399 (-) | 489 | WP_005882724.1 | pantetheine-phosphate adenylyltransferase | - |
| NB644_RS00055 (NB644_00055) | rsmD | 9438..10079 (-) | 642 | WP_050757806.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| NB644_RS00060 (NB644_00060) | - | 10116..11465 (-) | 1350 | WP_005882719.1 | M16 family metallopeptidase | - |
| NB644_RS00065 (NB644_00065) | - | 11504..12847 (-) | 1344 | WP_269310576.1 | M16 family metallopeptidase | - |
| NB644_RS00070 (NB644_00070) | pilA | 12919..13974 (+) | 1056 | WP_005882714.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| NB644_RS00075 (NB644_00075) | - | 13986..14666 (+) | 681 | WP_036604126.1 | cell division ATP-binding protein FtsE | - |
| NB644_RS00080 (NB644_00080) | - | 14663..15592 (+) | 930 | WP_005882710.1 | cell division protein FtsX | - |
| NB644_RS00085 (NB644_00085) | rpoH | 15801..16700 (+) | 900 | WP_005882708.1 | RNA polymerase sigma factor RpoH | - |
| NB644_RS00090 (NB644_00090) | - | 16722..17498 (-) | 777 | WP_050757757.1 | methyltransferase domain-containing protein | - |
| NB644_RS00095 (NB644_00095) | - | 17677..18438 (+) | 762 | WP_005882704.1 | phosphoribosyltransferase family protein | - |
| NB644_RS00100 (NB644_00100) | - | 18440..18910 (+) | 471 | WP_005882702.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37616.89 Da Isoelectric Point: 4.9325
>NTDB_id=694650 NB644_RS00070 WP_005882714.1 12919..13974(+) (pilA) [Oxalobacter formigenes strain HOxSLD-2]
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
Nucleotide
Download Length: 1056 bp
>NTDB_id=694650 NB644_RS00070 WP_005882714.1 12919..13974(+) (pilA) [Oxalobacter formigenes strain HOxSLD-2]
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
60.526 |
86.61 |
0.524 |