Detailed information NTG0694633

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NB639_RS10760
• Genome accession: NZ_CP098244
• Coordinates: 2359433..2360488 (-)
• Length: 351 a.a.
• NCBI ID: WP_005882714.1
• Uniprot ID: C3XCV6
• Organism: Oxalobacter formigenes strain OxWR1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2354433..2365488

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NB639_RS10730 (NB639_10710)	-	2354497..2354967 (-)	471	WP_269307431.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
NB639_RS10735 (NB639_10715)	-	2354969..2355736 (-)	768	WP_269307432.1	ComF family protein	-
NB639_RS10740 (NB639_10720)	-	2355909..2356685 (+)	777	WP_269307433.1	methyltransferase domain-containing protein	-
NB639_RS10745 (NB639_10725)	rpoH	2356707..2357606 (-)	900	WP_269307434.1	RNA polymerase sigma factor RpoH	-
NB639_RS10750 (NB639_10730)	-	2357815..2358744 (-)	930	WP_005882710.1	cell division protein FtsX	-
NB639_RS10755 (NB639_10735)	-	2358741..2359421 (-)	681	WP_036604126.1	cell division ATP-binding protein FtsE	-
NB639_RS10760 (NB639_10740)	pilA	2359433..2360488 (-)	1056	WP_005882714.1	signal recognition particle-docking protein FtsY	Machinery gene
NB639_RS10765 (NB639_10745)	-	2360560..2361903 (+)	1344	WP_269307436.1	M16 family metallopeptidase	-
NB639_RS10770 (NB639_10750)	-	2361942..2363291 (+)	1350	WP_269307437.1	M16 family metallopeptidase	-
NB639_RS10775 (NB639_10755)	rsmD	2363328..2363969 (+)	642	WP_050757806.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NB639_RS10780 (NB639_10760)	coaD	2364008..2364496 (+)	489	WP_005882724.1	pantetheine-phosphate adenylyltransferase	-
NB639_RS10785 (NB639_10765)	-	2364556..2364804 (+)	249	WP_269307438.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 351 a.a.
• Molecular weight: 37616.89 Da
• Isoelectric Point: 4.9325

>NTDB_id=694633 NB639_RS10760 WP_005882714.1 2359433..2360488(-) (pilA) [Oxalobacter formigenes strain OxWR1]
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS

Nucleotide

• Length: 1056 bp

>NTDB_id=694633 NB639_RS10760 WP_005882714.1 2359433..2360488(-) (pilA) [Oxalobacter formigenes strain OxWR1]
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (74-130)

• SRP54-type protein, GTPase domain (SRP54) (152-350)

3D structure

• AlphaFold DB: C3XCV6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	60.526	86.61	0.524