Detailed information NTG0694618

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NB640_RS08190
• Genome accession: NZ_CP098242
• Coordinates: 1645086..1646153 (-)
• Length: 355 a.a.
• NCBI ID: WP_269308246.1
• Uniprot ID: A0A9E9LVW7
• Organism: Oxalobacter vibrioformis strain WoOx3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1640086..1651153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NB640_RS08165 (NB640_08170)	-	1640468..1641337 (+)	870	WP_269308242.1	methyltransferase domain-containing protein	-
NB640_RS08170 (NB640_08175)	-	1641374..1642048 (-)	675	Protein_1600	DUF5984 family protein	-
NB640_RS08175 (NB640_08180)	rpoH	1642156..1643052 (-)	897	WP_269308243.1	RNA polymerase sigma factor RpoH	-
NB640_RS08180 (NB640_08185)	-	1643454..1644383 (-)	930	WP_269308244.1	ABC transporter permease	-
NB640_RS08185 (NB640_08190)	-	1644380..1645066 (-)	687	WP_269308245.1	cell division ATP-binding protein FtsE	-
NB640_RS08190 (NB640_08195)	pilA	1645086..1646153 (-)	1068	WP_269308246.1	signal recognition particle-docking protein FtsY	Machinery gene
NB640_RS08195 (NB640_08200)	-	1646242..1647609 (+)	1368	WP_269308247.1	pitrilysin family protein	-
NB640_RS08200 (NB640_08205)	-	1647642..1649009 (+)	1368	WP_269308248.1	pitrilysin family protein	-
NB640_RS08205 (NB640_08210)	rsmD	1649044..1649691 (+)	648	WP_269308249.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NB640_RS08210 (NB640_08215)	coaD	1649729..1650217 (+)	489	WP_269308250.1	pantetheine-phosphate adenylyltransferase	-
NB640_RS08215 (NB640_08220)	-	1650284..1650535 (+)	252	WP_269308251.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38579.86 Da
• Isoelectric Point: 4.9672

>NTDB_id=694618 NB640_RS08190 WP_269308246.1 1645086..1646153(-) (pilA) [Oxalobacter vibrioformis strain WoOx3]
MFSFFRKKTETNASDEAKTDTPSTPETTENPAAPSPQTETHVPDTATSAPPSQEHPAENRSWFDRLKDGLSKTSANLNIF
GTVMLDDDLYDELEMALLTSDAGIEATEQLLYDLREKVGRERLSRPEDIRNALRELLTDMLKPLEKRLEIGRHQPLVMMI
AGVNGAGKTTTIGKLARHLQAHGQTVLLAAGDTFRAAAREQLAIWGDRNQITVIAQESGDPAAVAFDAVQSAKAKGIDVV
MVDTAGRLPTQLHLMEELKKVQRVIGKGETSAPHEVLLVIDGNTGQNALAQVRAFDEALTLTGLIVTKLDGTAKGGILAA
IAKVRPIPVYFIGVGEKIEDLQPFVAEEFTRALLN

Nucleotide

• Length: 1068 bp

>NTDB_id=694618 NB640_RS08190 WP_269308246.1 1645086..1646153(-) (pilA) [Oxalobacter vibrioformis strain WoOx3]
ATGTTCAGCTTTTTTCGAAAAAAAACCGAAACAAATGCCTCCGATGAGGCAAAAACAGACACACCTTCCACACCGGAAAC
AACAGAGAATCCCGCTGCACCAAGCCCACAAACTGAAACTCACGTTCCTGATACTGCCACAAGCGCGCCGCCAAGCCAAG
AACATCCGGCAGAAAATCGCTCATGGTTTGATCGGCTTAAAGACGGTTTATCCAAAACCTCAGCCAATCTCAATATTTTC
GGCACCGTCATGCTGGATGACGACCTGTACGATGAACTGGAAATGGCGCTCTTGACATCGGACGCCGGTATTGAGGCTAC
GGAACAGCTTCTTTATGACCTTCGGGAGAAAGTCGGCCGGGAGCGTCTGTCACGACCGGAAGACATTCGTAACGCCCTGC
GGGAACTCCTGACCGATATGCTCAAACCACTTGAGAAACGTCTTGAAATCGGCCGTCACCAGCCACTGGTCATGATGATT
GCTGGCGTCAACGGCGCAGGCAAAACCACAACCATCGGCAAGCTGGCCCGCCATCTTCAGGCACATGGCCAAACGGTACT
GCTTGCTGCAGGAGATACCTTCCGGGCCGCAGCCCGGGAACAGCTGGCCATCTGGGGTGACCGCAACCAGATTACGGTCA
TTGCACAGGAATCGGGTGACCCGGCTGCGGTTGCCTTTGATGCGGTACAATCTGCCAAGGCAAAAGGTATCGATGTTGTC
ATGGTGGATACGGCTGGCCGTCTGCCCACGCAACTGCATCTGATGGAAGAGCTGAAAAAAGTCCAACGCGTCATCGGGAA
AGGCGAAACATCCGCACCGCATGAAGTGCTTCTGGTGATCGACGGTAATACCGGACAGAATGCGCTGGCACAGGTAAGGG
CATTTGATGAGGCGCTCACCCTCACCGGACTGATCGTCACCAAACTGGATGGCACGGCAAAGGGAGGCATTCTCGCTGCC
ATTGCCAAAGTCCGTCCCATTCCGGTTTACTTTATCGGTGTGGGTGAGAAAATTGAAGATCTGCAACCTTTTGTTGCCGA
GGAATTTACGCGAGCGTTATTGAACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (156-354)

• SRP54-type protein, helical bundle domain (SRP54_N) (67-135)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.161	100	0.577