Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SR187_RS08205 Genome accession   NZ_AP018400
Coordinates   1731132..1731866 (-) Length   244 a.a.
NCBI ID   WP_120172160.1    Uniprot ID   A0A2Z5TPY8
Organism   Streptococcus ruminantium strain GUT-187     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1726132..1736866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR187_RS08175 (SR187_8385) rnpM 1726217..1726513 (-) 297 WP_120172155.1 RNase P modulator RnpM -
  SR187_RS08180 (SR187_8390) nusA 1726530..1727672 (-) 1143 WP_024531897.1 transcription termination factor NusA -
  SR187_RS08185 (SR187_8395) rimP 1727752..1728222 (-) 471 WP_120172157.1 ribosome maturation factor RimP -
  SR187_RS08190 (SR187_8400) trmB 1728613..1729248 (-) 636 WP_024531895.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SR187_RS08195 (SR187_8405) ccrZ 1729245..1730039 (-) 795 WP_024531894.1 cell cycle regulator CcrZ -
  SR187_RS08200 (SR187_8410) - 1730089..1731135 (-) 1047 WP_120172159.1 ABC transporter permease -
  SR187_RS08205 (SR187_8415) pptA 1731132..1731866 (-) 735 WP_120172160.1 ABC transporter ATP-binding protein Regulator
  SR187_RS08210 (SR187_8420) - 1731929..1732342 (+) 414 WP_120172162.1 HIT family protein -
  SR187_RS08215 (SR187_8425) - 1732344..1732637 (+) 294 WP_120172164.1 chemotaxis protein -
  SR187_RS08220 (SR187_8430) - 1732687..1733883 (-) 1197 WP_024531889.1 LCP family protein -
  SR187_RS08225 (SR187_8435) - 1733880..1734407 (-) 528 WP_120172165.1 GNAT family N-acetyltransferase -
  SR187_RS08230 (SR187_8440) tsaE 1734400..1734840 (-) 441 WP_029187388.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SR187_RS08235 (SR187_8445) - 1735072..1736736 (-) 1665 WP_024531886.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27177.51 Da        Isoelectric Point: 4.4958

>NTDB_id=69461 SR187_RS08205 WP_120172160.1 1731132..1731866(-) (pptA) [Streptococcus ruminantium strain GUT-187]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQILIDGQSLTQDAEHYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLNWEQAWNRAERLLNIFRLDEKLDWFPVHFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAIADLLALLEEEKAKGTSILMSTHVLDSAEKMCDRFVILHQGQVRAAGNLAELQATFAMEEASLSDIYLALTQE
GVVR

Nucleotide


Download         Length: 735 bp        

>NTDB_id=69461 SR187_RS08205 WP_120172160.1 1731132..1731866(-) (pptA) [Streptococcus ruminantium strain GUT-187]
ATGTTAGAAGTAAAAAATGTCACAGGTGGCTATGTAAATATCCCTGTCTTGAAAGATGTATCTTTTACAGTTGAAGATGG
ACAGTTGGTCGGCTTAATCGGTCTTAATGGTGCTGGAAAATCAACTACCATAAAAGAAATTATCGGCCTTTTGACACCCT
ATCAAGGACAGATTTTGATTGATGGCCAAAGCCTGACACAGGATGCAGAACATTATCGAAAAAAGATTGGTTTTATCCCA
GAAACGCCTAGTTTATACGAGGAGCTAACTCTCAAAGAACATTTGGAAGTTGTTGCTATGGCTTATGATTTGAATTGGGA
GCAGGCTTGGAACCGAGCAGAGCGGTTGCTGAATATTTTTCGTCTGGACGAAAAGTTGGATTGGTTCCCTGTTCATTTTT
CAAAAGGAATGAAGCAAAAAGTGATGATTATCTGTGCATTTATGGTAGAACCAAGCCTGTTGATCGTTGACGAGCCTTTT
TTAGGTTTGGATCCGGTAGCTATTGCCGATTTGCTTGCTCTCCTAGAGGAAGAAAAAGCAAAGGGAACTTCTATCTTGAT
GTCAACGCATGTTCTGGATTCGGCTGAAAAAATGTGTGATCGGTTTGTTATTCTCCACCAAGGGCAGGTACGAGCAGCTG
GAAATTTGGCTGAGCTACAGGCAACTTTTGCTATGGAAGAGGCCAGTCTCAGTGATATTTATCTTGCCTTGACGCAAGAG
GGAGTGGTCAGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z5TPY8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.222

97.951

0.717
  pptA Streptococcus thermophilus LMD-9

72.385

97.951

0.709

Multiple sequence alignment