Detailed information NTG0694356

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PCK11_RS19905
• Genome accession: NZ_CP115179
• Coordinates: 4091061..4092086 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B-LamR
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4086061..4097086

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PCK11_RS19875 (PCK11_19865)	zapB	4086145..4086390 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
PCK11_RS19880 (PCK11_19870)	rraA	4086475..4086960 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PCK11_RS19885 (PCK11_19875)	menA	4087053..4087979 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PCK11_RS19890 (PCK11_19880)	hslU	4088046..4089377 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PCK11_RS19895 (PCK11_19885)	hslV	4089387..4089917 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PCK11_RS19900 (PCK11_19890)	ftsN	4090010..4090969 (-)	960	WP_000068828.1	cell division protein FtsN	-
PCK11_RS19905 (PCK11_19895)	cytR	4091061..4092086 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PCK11_RS19910 (PCK11_19900)	priA	4092242..4094440 (-)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PCK11_RS19915 (PCK11_19905)	rpmE	4094643..4094855 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
PCK11_RS19920 (PCK11_19910)	-	4094910..4095533 (-)	624	WP_000720774.1	TIGR02117 family protein	-
PCK11_RS19925 (PCK11_19915)	yiiX	4095540..4096148 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PCK11_RS19930 (PCK11_19920)	metJ	4096332..4096649 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=694356 PCK11_RS19905 WP_000644904.1 4091061..4092086(-) (cytR) [Escherichia coli strain B-LamR]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=694356 PCK11_RS19905 WP_000644904.1 4091061..4092086(-) (cytR) [Escherichia coli strain B-LamR]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628