Detailed information NTG0693440

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: M8561_RS18010
• Genome accession: NZ_CP097895
• Coordinates: 3658940..3660085 (+)
• Length: 381 a.a.
• NCBI ID: WP_024085922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3653940..3665085

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8561_RS17990 (M8561_17990)	-	3654415..3655131 (-)	717	WP_014306017.1	Crp/Fnr family transcriptional regulator	-
M8561_RS17995 (M8561_17995)	narK	3655229..3656419 (-)	1191	WP_003151073.1	nitrate transporter NarK	-
M8561_RS18000 (M8561_18000)	argS	3656553..3658223 (-)	1671	WP_003151071.1	arginine--tRNA ligase	-
M8561_RS18005 (M8561_18005)	-	3658220..3658648 (-)	429	WP_003151069.1	DUF1934 family protein	-
M8561_RS18010 (M8561_18010)	rapF	3658940..3660085 (+)	1146	WP_024085922.1	Rap family tetratricopeptide repeat protein	Regulator
M8561_RS18015 (M8561_18015)	-	3660069..3660188 (+)	120	WP_131242041.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
M8561_RS18020 (M8561_18020)	speB	3660311..3660748 (-)	438	Protein_3495	agmatinase	-
M8561_RS18025 (M8561_18025)	-	3660910..3662337 (-)	1428	WP_046341451.1	DUF885 family protein	-
M8561_RS18030 (M8561_18030)	-	3662338..3663678 (-)	1341	WP_025853604.1	MATE family efflux transporter	-
M8561_RS18035 (M8561_18035)	-	3663675..3664730 (-)	1056	WP_046341452.1	SagB/ThcOx family dehydrogenase	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45768.27 Da
• Isoelectric Point: 5.0694

>NTDB_id=693440 M8561_RS18010 WP_024085922.1 3658940..3660085(+) (rapF) [Bacillus velezensis strain B1]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=693440 M8561_RS18010 WP_024085922.1 3658940..3660085(+) (rapF) [Bacillus velezensis strain B1]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGATGACCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTACGCGCGGCAGGCTTATTTAATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACGCAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533