Detailed information NTG0693436

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: M8561_RS17070
• Genome accession: NZ_CP097895
• Coordinates: 3474193..3475356 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3469193..3480356

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8561_RS17040 (M8561_17040)	-	3469458..3469877 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
M8561_RS17045 (M8561_17045)	comFC	3469951..3470640 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
M8561_RS17050 (M8561_17050)	-	3470646..3470930 (-)	285	WP_003151389.1	competence protein ComFB	-
M8561_RS17055 (M8561_17055)	comFA	3470988..3472373 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
M8561_RS17060 (M8561_17060)	-	3472481..3473329 (-)	849	WP_024085866.1	DegV family protein	-
M8561_RS17065 (M8561_17065)	degU	3473427..3474116 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
M8561_RS17070 (M8561_17070)	degS	3474193..3475356 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
M8561_RS17075 (M8561_17075)	-	3475579..3476226 (+)	648	WP_003151384.1	YigZ family protein	-
M8561_RS17080 (M8561_17080)	-	3476231..3477445 (+)	1215	WP_024085868.1	LCP family protein	-
M8561_RS17085 (M8561_17085)	-	3477535..3478611 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
M8561_RS17090 (M8561_17090)	-	3478744..3479940 (-)	1197	WP_024085869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=693436 M8561_RS17070 WP_003151385.1 3474193..3475356(-) (degS) [Bacillus velezensis strain B1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=693436 M8561_RS17070 WP_003151385.1 3474193..3475356(-) (degS) [Bacillus velezensis strain B1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948