Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   M8561_RS07175 Genome accession   NZ_CP097895
Coordinates   1400945..1401541 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain B1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1395945..1406541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8561_RS07145 (M8561_07145) - 1396159..1396614 (+) 456 WP_024085239.1 flavodoxin -
  M8561_RS07150 (M8561_07150) dapD 1396696..1397406 (+) 711 WP_003154598.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  M8561_RS07155 (M8561_07155) - 1397477..1398601 (+) 1125 WP_024085240.1 N-acetyldiaminopimelate deacetylase -
  M8561_RS07160 (M8561_07160) - 1398662..1398907 (+) 246 WP_003154596.1 YkuS family protein -
  M8561_RS07165 (M8561_07165) - 1398941..1399747 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  M8561_RS07170 (M8561_07170) - 1400035..1400493 (+) 459 WP_024085241.1 TlpA disulfide reductase family protein -
  M8561_RS07175 (M8561_07175) rok 1400945..1401541 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  M8561_RS07180 (M8561_07180) - 1401562..1402554 (-) 993 WP_003154589.1 hypothetical protein -
  M8561_RS07185 (M8561_07185) - 1402700..1403302 (+) 603 WP_024085242.1 molybdenum cofactor guanylyltransferase -
  M8561_RS07190 (M8561_07190) - 1403354..1404373 (+) 1020 WP_024085243.1 molybdopterin-synthase adenylyltransferase MoeB -
  M8561_RS07195 (M8561_07195) glp 1404391..1405683 (+) 1293 WP_015388302.1 gephyrin-like molybdotransferase Glp -
  M8561_RS07200 (M8561_07200) mobB 1405644..1406165 (+) 522 WP_184123311.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=693398 M8561_RS07175 WP_003154591.1 1400945..1401541(+) (rok) [Bacillus velezensis strain B1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=693398 M8561_RS07175 WP_003154591.1 1400945..1401541(+) (rok) [Bacillus velezensis strain B1]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCGCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCAGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATCTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843