Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M8561_RS07075 Genome accession   NZ_CP097895
Coordinates   1385072..1385536 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain B1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380072..1390536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8561_RS07055 (M8561_07055) - 1380552..1382372 (+) 1821 WP_015417363.1 PAS domain-containing protein -
  M8561_RS07060 (M8561_07060) - 1382398..1383567 (-) 1170 WP_007611083.1 aminotransferase A -
  M8561_RS07065 (M8561_07065) - 1383768..1383929 (-) 162 WP_007409608.1 hypothetical protein -
  M8561_RS07070 (M8561_07070) cheV 1384118..1385029 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  M8561_RS07075 (M8561_07075) kre 1385072..1385536 (-) 465 WP_003154622.1 YkyB family protein Regulator
  M8561_RS07080 (M8561_07080) - 1385659..1386951 (-) 1293 WP_024085236.1 MFS transporter -
  M8561_RS07085 (M8561_07085) - 1387027..1387521 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  M8561_RS07090 (M8561_07090) - 1387596..1388459 (-) 864 WP_024085238.1 metallophosphoesterase -
  M8561_RS07095 (M8561_07095) fadH 1388603..1389367 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  M8561_RS07100 (M8561_07100) - 1389477..1390022 (+) 546 Protein_1337 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=693397 M8561_RS07075 WP_003154622.1 1385072..1385536(-) (kre) [Bacillus velezensis strain B1]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=693397 M8561_RS07075 WP_003154622.1 1385072..1385536(-) (kre) [Bacillus velezensis strain B1]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929