Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   NAA64_RS04825 Genome accession   NZ_CP097887
Coordinates   1013175..1014218 (+) Length   347 a.a.
NCBI ID   WP_002509180.1    Uniprot ID   A0A7V7SQH4
Organism   Staphylococcus arlettae strain SA283     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1008175..1019218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NAA64_RS04800 (NAA64_04800) - 1008855..1009580 (+) 726 WP_021459029.1 type 1 glutamine amidotransferase -
  NAA64_RS04805 (NAA64_04805) - 1010067..1011053 (-) 987 WP_103388397.1 FUSC family protein -
  NAA64_RS04810 (NAA64_04810) map 1011219..1011971 (+) 753 WP_021459027.1 type I methionyl aminopeptidase -
  NAA64_RS04815 (NAA64_04815) - 1012074..1012460 (+) 387 WP_002509178.1 hypothetical protein -
  NAA64_RS04820 (NAA64_04820) liaF 1012477..1013178 (+) 702 WP_002509179.1 cell wall-active antibiotics response protein LiaF -
  NAA64_RS04825 (NAA64_04825) vraS 1013175..1014218 (+) 1044 WP_002509180.1 sensor histidine kinase Regulator
  NAA64_RS04830 (NAA64_04830) vraR 1014208..1014837 (+) 630 WP_002509181.1 response regulator transcription factor Regulator
  NAA64_RS04835 (NAA64_04835) - 1014900..1015979 (-) 1080 WP_103388398.1 YihY/virulence factor BrkB family protein -
  NAA64_RS04840 (NAA64_04840) - 1016259..1016543 (-) 285 WP_002509183.1 hypothetical protein -
  NAA64_RS04845 (NAA64_04845) - 1016550..1017014 (-) 465 WP_002509184.1 low molecular weight protein-tyrosine-phosphatase -
  NAA64_RS04850 (NAA64_04850) - 1017150..1017353 (+) 204 WP_021459025.1 DUF1128 family protein -
  NAA64_RS04855 (NAA64_04855) - 1017365..1018603 (+) 1239 WP_103388399.1 aminopeptidase -
  NAA64_RS04860 (NAA64_04860) - 1018637..1019164 (+) 528 WP_103388400.1 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39859.16 Da        Isoelectric Point: 5.2631

>NTDB_id=693343 NAA64_RS04825 WP_002509180.1 1013175..1014218(+) (vraS) [Staphylococcus arlettae strain SA283]
MNHYIRAIGSMLILVYSTLIAFFFIDKIFVNIMYFQGMFYTQIFGIPVFLFLNLLIILLCIIVGSVLAYKINQQNHWLQT
QIERSIEGETVGINDQDIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESQLTPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVIHDI
EDFTVPKGIEDHLFRITQEAISNTLRHSNGTKVTIELFNQEAYLLLRIQDNGIGFNVDDKAEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLDKEDIDAN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=693343 NAA64_RS04825 WP_002509180.1 1013175..1014218(+) (vraS) [Staphylococcus arlettae strain SA283]
ATGAATCACTACATTAGAGCAATAGGCTCTATGCTAATATTAGTATATAGTACATTAATTGCTTTTTTCTTTATAGATAA
AATATTTGTAAATATTATGTATTTTCAAGGTATGTTTTATACCCAAATATTTGGTATTCCAGTATTTTTATTTTTAAATT
TGCTCATAATTTTATTATGTATCATTGTAGGATCGGTTTTAGCTTATAAAATAAACCAGCAAAACCATTGGCTACAAACA
CAAATTGAACGTTCAATTGAAGGAGAAACAGTAGGGATTAATGACCAAGATATAGAACTTTATAATGAAACTATAGAGCT
CTATCAAACGTTAGTTCCACTCAATCAAGAAGTACATAAACTGCGAATGAAGACCCAAAATTTAACAAATGAATCTTATA
ATTTAAACGATGTCAAAGTTAAAAAAATAATCGAAGATGAACGACAAAGATTGGCTAGGGAATTACATGATTCAGTGAGT
CAGCAACTTTTTGCAGCTAGCATGATGTTATCAGCTATCAAAGAATCTCAATTAACACCACCTTTAGATCAACAAATCCC
TACATTAGAAAAAATGGTACAAGATTCTCAACTAGAAATGAGAGCATTATTACTACATTTAAGACCAATTGGTTTAAAAG
ATAAGTCTCTCGGAGAAGGTATTAAAGATTTAGTTGTCGATTTACAGAAAAAAGTACCAATGAAGGTCATACATGACATT
GAAGATTTTACTGTACCTAAAGGTATTGAAGATCATTTGTTTCGTATTACGCAAGAAGCGATATCCAATACATTACGTCA
TTCCAACGGTACAAAAGTAACAATTGAATTATTTAATCAAGAAGCATATTTATTATTACGTATTCAAGATAACGGTATTG
GTTTTAACGTAGATGATAAAGCTGAACAAAGTTATGGATTGAAAAATATGCGGGAGCGTGCATTAGAAATAGGTGCCACA
TTCCATATTGTATCGCTGCCTGATTCAGGTACTAGAATAGAAGTGAAAGCACCATTAGATAAGGAGGATATAGATGCCAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V7SQH4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.63

98.847

0.876