Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxO   Type   Regulator
Locus tag   M8C01_RS11645 Genome accession   NZ_CP097858
Coordinates   2506724..2508127 (-) Length   467 a.a.
NCBI ID   WP_005439670.1    Uniprot ID   -
Organism   Vibrio owensii strain GL-605     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context


Location: 2501724..2513127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8C01_RS11610 moaE 2502273..2502728 (-) 456 WP_009707279.1 molybdopterin synthase catalytic subunit MoaE -
  M8C01_RS11615 moaD 2502731..2502988 (-) 258 WP_009707280.1 molybdopterin synthase sulfur carrier subunit -
  M8C01_RS11620 moaC 2502988..2503464 (-) 477 WP_005439664.1 cyclic pyranopterin monophosphate synthase MoaC -
  M8C01_RS11625 moaB 2503491..2504003 (-) 513 WP_005433210.1 molybdenum cofactor biosynthesis protein B -
  M8C01_RS11630 moaA 2504105..2505094 (-) 990 WP_005439665.1 GTP 3',8-cyclase MoaA -
  M8C01_RS11635 - 2505392..2506285 (+) 894 WP_264403416.1 YvcK family protein -
  M8C01_RS11640 luxU 2506383..2506727 (-) 345 WP_264403418.1 quorum-sensing phosphorelay protein LuxU -
  M8C01_RS11645 luxO 2506724..2508127 (-) 1404 WP_005439670.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  M8C01_RS11650 uvrB 2508453..2510483 (-) 2031 WP_264403419.1 excinuclease ABC subunit UvrB -

Sequence


Protein


Download         Length: 467 a.a.        Molecular weight: 52180.70 Da        Isoelectric Point: 5.8849

>NTDB_id=693108 M8C01_RS11645 WP_005439670.1 2506724..2508127(-) (luxO) [Vibrio owensii strain GL-605]
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFIRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
ISKFIEPEIMTVSDIMPLWMTEKMAIEQAIQACDGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV

Nucleotide


Download         Length: 1404 bp        

>NTDB_id=693108 M8C01_RS11645 WP_005439670.1 2506724..2508127(-) (luxO) [Vibrio owensii strain GL-605]
ATGCAACAAATAACAGAAGGTCAAAAGTCTCGTTATCTACTAATGGTAGAAGACACCGCATCCGTTGCGGCATTGTACCG
TTCTTACCTGACGCCTCTCGGCATCGATATTAATATTGTTGGAACAGGCAGAGACGCCATCGAAAGCCTGAACCATCGAA
TTCCCGATCTGATTCTGCTCGATCTCCGCTTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAC
CCAGACGTGCCAATCATCTTTATGACTGCACATGGCTCTATCGATACAGCGGTAGAAGCGATGCGTCACGGTTCTCAAGA
CTTCTTAATCAAACCATGTGAAGCCGACCGTCTTCGTGTCACGGTGAACAACGCAATTCGCAAAGCAACCAAGCTTAAGA
ATGAAGCGGATAATCCGGGTAACCAAAATTACCAAGGGTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGCACC
ATTGACTCCGCTGCGAGCAGTAAAGCAAGTATTTTCATCACGGGTGAAAGTGGTACCGGTAAAGAAGTGTGTGCCGAAGC
CATTCACGCAGCAAGCAAACGTGGTGATAAGCCGTTTATCGCTATTAACTGTGCTGCGATCCCAAAAGATCTAATTGAAA
GTGAATTGTTTGGTCACGTAAAAGGCGCGTTTACTGGTGCTGCGAATGATCGCCAAGGTGCGGCTGAGCTTGCCGATGGT
GGCACGCTGTTCCTTGATGAATTGTGTGAAATGGACTTAGATCTTCAAACTAAGTTATTGCGCTTTATTCAGACGGGTAC
TTTCCAAAAAGTGGGCTCTTCAAAGATGAAGAGTGTCGACGTACGATTCGTGTGTGCGACCAACCGCGACCCTTGGAAAG
AAGTGCAGGAAGGCCGTTTCCGTGAAGACTTGTACTACCGTTTGTACGTGATTCCTTTACACCTTCCACCGTTGCGTGAG
CGCGGCGAAGACGTGATTGAAATTGCGTATTCGCTACTGGGCTATATGTCTCACGAGGAAGGCAAGAGTTTTATCCGTTT
TGCACAAGATGTGATTGAACGTTTTAACAGTTACGAATGGCCGGGTAACGTTCGTCAGTTGCAAAACGTACTGCGCAACA
TTGTGGTACTGAACAATGGCAAAGAAATTACCTTGGACATGCTGCCACCACCACTGAATCAACCAGTGGTTCGTCAATCG
ATTTCAAAATTTATTGAACCTGAAATCATGACGGTGTCAGACATTATGCCGCTTTGGATGACTGAAAAAATGGCCATCGA
GCAGGCGATTCAGGCGTGTGACGGCAACATTCCACGCGCTGCGGGCTACCTAGATGTCAGCCCTTCGACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAGAACGTATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.384

95.931

0.829