Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   M9H69_RS08570 Genome accession   NZ_CP097843
Coordinates   1694388..1696157 (-) Length   589 a.a.
NCBI ID   WP_250315396.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1689388..1701157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08540 (M9H69_08540) - 1689877..1690242 (-) 366 WP_000216438.1 Asp23/Gls24 family envelope stress response protein -
  M9H69_RS08545 (M9H69_08545) rpmB 1690502..1690690 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  M9H69_RS08550 (M9H69_08550) - 1690797..1691471 (-) 675 WP_250315393.1 hypothetical protein -
  M9H69_RS08555 (M9H69_08555) - 1691477..1691923 (-) 447 WP_000776582.1 LytTR family DNA-binding domain-containing protein -
  M9H69_RS08560 (M9H69_08560) - 1692037..1692540 (-) 504 WP_250315394.1 phosphatase PAP2 family protein -
  M9H69_RS08565 (M9H69_08565) rcrQ 1692638..1694398 (-) 1761 WP_250315395.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS08570 (M9H69_08570) rcrP 1694388..1696157 (-) 1770 WP_250315396.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS08575 (M9H69_08575) - 1696141..1696602 (-) 462 WP_000360512.1 MarR family winged helix-turn-helix transcriptional regulator -
  M9H69_RS08580 (M9H69_08580) - 1696796..1697485 (+) 690 WP_084875933.1 DUF308 domain-containing protein -
  M9H69_RS08585 (M9H69_08585) - 1697533..1698249 (-) 717 WP_000532900.1 YebC/PmpR family DNA-binding transcriptional regulator -
  M9H69_RS08590 (M9H69_08590) - 1698346..1699716 (-) 1371 WP_250315397.1 MATE family efflux transporter -
  M9H69_RS08595 (M9H69_08595) - 1699826..1700380 (+) 555 WP_000060288.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65426.77 Da        Isoelectric Point: 5.4075

>NTDB_id=692949 M9H69_RS08570 WP_250315396.1 1694388..1696157(-) (rcrP) [Streptococcus oralis strain HP01]
MKKLAKRITGKEWGMIVLAILFTCFSVYLELEVPTYISQITELLGTSGTQLDALWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRTDVFHQVLDFSQTEIKRFSIPSLLTRTTNDITQIQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTILMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDEKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
PSIENPGHAQTADPSIQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DEVNVQDYDFEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALEMAQSKSFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQELAEKTQSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=692949 M9H69_RS08570 WP_250315396.1 1694388..1696157(-) (rcrP) [Streptococcus oralis strain HP01]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGGATGATTGTCCTCGCGATTCTTTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTACCGACCTACATTTCACAAATTACAGAGTTACTTGGAACGTCTGGAACGCAGTTGGATGCAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGCGTTGCAGCATCCTATACAACCCATCTACGCACTGATGTATTTCATCAGGTTTTGGATTTTTCGCAGACAGAGATCAA
ACGTTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATCACTCAGATTCAGATGCTCTTTACTATGGGCTTAC
AGGTAGTGACTCGTGGGCCTATCATGGCCATCTGGGCCATTGGAAAAATCCTTGGGAAGTCGGAATACTGGCTCTGGGCA
GTGGTTGTGGCTGTTATTGTGAATGTCTTGATGACCACTATTCTCATGACTCTGGCCTTTCCAAAACAATCTGTCATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGCTTGACTGGGATTCGAGTTGTTCGTGCATACAATGCGGAAG
ATTACCAAGATGAAAAATTTGAAGCAGCCAATGATGAGGTGACACGTCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCAATCATGATGGCCATTTCAAGTGGACTAAGTTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGACGC
AAGTTTGGCAGAACGTTTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTAGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
CCTTCTATTGAAAATCCTGGTCATGCACAGACGGCGGATCCTTCAATTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAATTCTGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATTG
GATCGACTGGATCAGGTAAGTCCACGCTTGTCAACCTCTTGCCTCGTTTTTACGACGTTTCAGATGGAGAAATCCTAGTG
GACGAAGTTAATGTTCAAGACTATGACTTTGAAGATTTGCGCAACAAGGTTGGTTATATTCCTCAAAAAGCTGTGCTCTT
TTCTGGAGATGTCAAGGGGAACTTGGACTTTGGCAAAAGCAAAGAAACTCCTCTAAGCGAAGCTGCTATGTGGCAAGCCC
TTGAAATGGCCCAGTCTAAAAGCTTCATAGAGGATAAGGAAGCAGGACTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATTTTTGATGACTC
CTTCTCAGCCTTGGACTACAAGACGGATCGTATCTTACGCCAAGAGCTAGCTGAGAAAACACAATCCATGACCAAGCTCA
TCGTAGCGCAGCGGATTTCTACCATTATGGATGCTGACCTGATCTTAGTCTTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCCACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

64.559

100

0.659