Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   M9H69_RS08565 Genome accession   NZ_CP097843
Coordinates   1692638..1694398 (-) Length   586 a.a.
NCBI ID   WP_250315395.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1687638..1699398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS08525 (M9H69_08525) - 1687685..1687879 (-) 195 WP_250315392.1 hypothetical protein -
  M9H69_RS08530 (M9H69_08530) - 1687876..1688082 (-) 207 WP_000409926.1 hypothetical protein -
  M9H69_RS08535 (M9H69_08535) - 1688207..1689874 (-) 1668 WP_247917882.1 DAK2 domain-containing protein -
  M9H69_RS08540 (M9H69_08540) - 1689877..1690242 (-) 366 WP_000216438.1 Asp23/Gls24 family envelope stress response protein -
  M9H69_RS08545 (M9H69_08545) rpmB 1690502..1690690 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  M9H69_RS08550 (M9H69_08550) - 1690797..1691471 (-) 675 WP_250315393.1 hypothetical protein -
  M9H69_RS08555 (M9H69_08555) - 1691477..1691923 (-) 447 WP_000776582.1 LytTR family DNA-binding domain-containing protein -
  M9H69_RS08560 (M9H69_08560) - 1692037..1692540 (-) 504 WP_250315394.1 phosphatase PAP2 family protein -
  M9H69_RS08565 (M9H69_08565) rcrQ 1692638..1694398 (-) 1761 WP_250315395.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS08570 (M9H69_08570) rcrP 1694388..1696157 (-) 1770 WP_250315396.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS08575 (M9H69_08575) - 1696141..1696602 (-) 462 WP_000360512.1 MarR family winged helix-turn-helix transcriptional regulator -
  M9H69_RS08580 (M9H69_08580) - 1696796..1697485 (+) 690 WP_084875933.1 DUF308 domain-containing protein -
  M9H69_RS08585 (M9H69_08585) - 1697533..1698249 (-) 717 WP_000532900.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64595.26 Da        Isoelectric Point: 5.1198

>NTDB_id=692948 M9H69_RS08565 WP_250315395.1 1692638..1694398(-) (rcrQ) [Streptococcus oralis strain HP01]
MENKKVSVWEQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVISASFLLIAVLVTM
FSMNWILALVTVVSTFVGFAAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMGRVFE
FLGEAEMQDESHKERQLTGMRGEVVFDRVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKDMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTGISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=692948 M9H69_RS08565 WP_250315395.1 1692638..1694398(-) (rcrQ) [Streptococcus oralis strain HP01]
ATGGAAAATAAAAAAGTGTCGGTCTGGGAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTTATTTCAAGCATCATTACCGTTTATGGTCCAACTAAGATTAAAGAAATTACTAACTTGATTTCAGATG
GCTTGATGACAGGAATTGATTTAGAGGCTGTTTCAAGTATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGTGCCATC
CTTAACTATACACAGGCCTATATCTTTTCAACAAGTATCCAACATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
GATCAATCGTTTGCCCCTTGGCTATTTTGATCGTCATTCGCAAGGGGACACTCTATCTCGTGTGACCAATGATGTGGATA
CGGCGGCGCAATCTCTCAACCAAAGTCTCGGAACAGTTATCTCAGCCAGCTTCTTGTTGATTGCTGTTTTGGTGACCATG
TTTAGTATGAACTGGATTTTAGCTCTGGTAACGGTTGTTTCTACGTTTGTTGGTTTTGCGGCGGTTTCAGTAATTATGGC
CAAGTCACAGGGTTATTTTAAAGCCCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ACAATGTAGTGACTAGCTACAACGCAGTGGACACCTCCAAAGCGAGATTTGCAGGTTTAAACCAAAACTTGCATGATAGT
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAATTTTAGCTATGTTTTGGTCAT
CATCGTTGGGGCTGCGCTTGCTCTAGAAGGGCATATCACTATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCCCTGTCACAGATTGCCCAAGGGATTACGAGCTTACAACAAGCGAGTGCAGCCATGGGACGTGTCTTTGAA
TTTCTAGGTGAAGCTGAGATGCAGGATGAATCCCATAAGGAAAGACAATTGACTGGCATGAGAGGAGAAGTGGTCTTTGA
TCGCGTATCCTTTGGTTATACACCAGAACGCACCATCATCCATGACTTTTCTGCGACAGCTCATGCAGGCCAGAAGGTCG
CTATCGTTGGGCCTACTGGAGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATTGATAAGGGAAGT
ATCCGTATCGATGGTGTCGATACCAAGGATATGAAGCGCTCAGAAGTACACGATGCCTTTTCAATGGTCTTGCAAGATAC
TTGGCTCTTTGAAGGAACGATTCGAGAAAATCTCATCTACAATCAAACGGGCATCAGTGATGAACGAATGATGGAAGCAA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTGTTTTGGATGACACCGTGACCTTG
TCTGTTGGACAAAAACAGCTCTTGACCATTGCTCGTGCCCTTCTCAAGGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGCTGATTCAAAAAGCCATGGACCGTTTGATGGAAGGCAGAACTTCCTTTGTCA
TCGCCCACCGCTTGTCAACGATTCGTAATGCAGATTTGATTCTTGTCATGAAAGATGGAAATATCATCGAGCAAGGCAAT
CACGAGGAGCTGATGGCGCAAGGTGGCTTCTATGCGGATCTCTACAATAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

67.295

99.659

0.671