Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   M9H69_RS07780 Genome accession   NZ_CP097843
Coordinates   1519529..1519822 (-) Length   97 a.a.
NCBI ID   WP_250315311.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1514529..1524822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS07770 (M9H69_07770) metF 1515996..1516862 (-) 867 WP_250315309.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  M9H69_RS07775 (M9H69_07775) metE 1516926..1519175 (-) 2250 WP_250315310.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  M9H69_RS07780 (M9H69_07780) HI0659 1519529..1519822 (-) 294 WP_250315311.1 helix-turn-helix transcriptional regulator Machinery gene
  M9H69_RS07785 (M9H69_07785) - 1519812..1520177 (-) 366 WP_250315312.1 type II toxin-antitoxin system RelE/ParE family toxin -
  M9H69_RS07790 (M9H69_07790) - 1520334..1520699 (-) 366 WP_250315313.1 TIGR02328 family protein -
  M9H69_RS07795 (M9H69_07795) - 1520683..1521087 (-) 405 WP_250315314.1 YbgA family protein -
  M9H69_RS07800 (M9H69_07800) - 1521300..1523168 (-) 1869 WP_247924003.1 P-loop NTPase fold protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10770.43 Da        Isoelectric Point: 5.2090

>NTDB_id=692940 M9H69_RS07780 WP_250315311.1 1519529..1519822(-) (HI0659) [Streptococcus oralis strain HP01]
MKNSAIGSNWKDVRSELFTKEEILESDMRVAIMSELIEARRDQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKN

Nucleotide


Download         Length: 294 bp        

>NTDB_id=692940 M9H69_RS07780 WP_250315311.1 1519529..1519822(-) (HI0659) [Streptococcus oralis strain HP01]
ATGAAGAATAGTGCCATTGGAAGTAATTGGAAGGATGTTCGGTCAGAACTTTTTACCAAGGAGGAAATACTTGAAAGTGA
TATGCGAGTAGCTATCATGAGTGAGTTGATTGAGGCCAGACGAGATCAAGGAATCAGTCAGAAAAAGCTAGAGGAACTCA
GTGGAGTAAGTCAGCCCGTCATAGCTAGGATGGAAACAGGCAAGACTAGCCCTCAATTGGATACGGTTTTGAAAGTTTTA
GCCAGTTTAGGCAAGACACTAGCAGTCGTCCCACTTGAACAGGAAAAAAATTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557