Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   MF619_RS13085 Genome accession   NZ_CP097784
Coordinates   2621679..2622431 (-) Length   250 a.a.
NCBI ID   WP_003152643.1    Uniprot ID   A0A6A8LH02
Organism   Bacillus velezensis strain V 3.14     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2616679..2627431
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MF619_RS13060 (MF619_002604) mreC 2617115..2617978 (-) 864 WP_032856925.1 rod shape-determining protein MreC -
  MF619_RS13065 (MF619_002605) mreB 2618009..2619022 (-) 1014 WP_003152647.1 cell shape-determining protein MreB -
  MF619_RS13070 (MF619_002606) radC 2619114..2619809 (-) 696 WP_032856927.1 RadC family protein -
  MF619_RS13075 (MF619_002607) - 2619841..2620410 (-) 570 WP_032856929.1 Maf family protein -
  MF619_RS13080 (MF619_002608) - 2620551..2621552 (-) 1002 WP_095324139.1 SPOR domain-containing protein -
  MF619_RS13085 (MF619_002609) comC 2621679..2622431 (-) 753 WP_003152643.1 prepilin peptidase Machinery gene
  MF619_RS13090 (MF619_002610) - 2622571..2623863 (-) 1293 WP_032856932.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -
  MF619_RS13095 (MF619_002611) - 2623922..2626564 (-) 2643 WP_003152640.1 valine--tRNA ligase -
  MF619_RS13100 (MF619_002612) - 2627017..2627208 (+) 192 WP_003152639.1 hypothetical protein -

Sequence

Protein


Download         Length: 250 a.a.        Molecular weight: 27152.80 Da        Isoelectric Point: 9.2521

>NTDB_id=692382 MF619_RS13085 WP_003152643.1 2621679..2622431(-) (comC) [Bacillus velezensis strain V 3.14]
MLLILFFLGLIFGSFFYTAACRIPLRISVISPRSSCSFCRLPLSWGELVPVVSYILQRGRCRNCRAKLSVMYPAAECWTA
CLFTAAGIHFGFSKELLVALLFLSLLMIVTMTDLQYMLIPDKVLLFFLPLFIAGRMFSPLDSWYAGFAGAVCGFFLLVFI
MFVSKGGIGAGDVKLFGVIGLTLGVKLVLIAFFLSVMIGAVYGMCAAARGSLGKKQPFPFAPAISAGSALSYLYGDELFS
FYIKLASGGA

Nucleotide


Download         Length: 753 bp        

>NTDB_id=692382 MF619_RS13085 WP_003152643.1 2621679..2622431(-) (comC) [Bacillus velezensis strain V 3.14]
GTGCTTTTGATTCTGTTTTTTCTCGGCTTGATTTTCGGTTCTTTTTTTTATACAGCAGCGTGCCGTATCCCGCTGCGAAT
CTCGGTTATTTCGCCGCGTTCATCCTGTTCGTTTTGCCGCTTGCCGCTCTCCTGGGGGGAGCTTGTGCCCGTCGTCTCCT
ATATTCTGCAAAGAGGCAGATGCAGAAACTGCCGTGCGAAGCTGTCGGTTATGTATCCGGCGGCGGAATGCTGGACGGCG
TGTTTATTCACGGCTGCAGGCATTCATTTCGGTTTCTCAAAAGAACTGTTAGTCGCGCTGTTATTTCTGTCTCTCCTCAT
GATTGTTACTATGACGGATCTGCAATATATGCTGATTCCTGACAAAGTTCTGCTGTTTTTTCTTCCGCTTTTCATCGCCG
GCCGAATGTTTTCTCCGCTGGATTCATGGTATGCAGGGTTTGCCGGAGCCGTTTGCGGATTTTTTCTGCTTGTTTTTATC
ATGTTTGTCAGTAAAGGAGGCATCGGCGCAGGTGATGTGAAACTGTTTGGGGTGATCGGCCTGACGCTCGGCGTGAAGCT
CGTGCTCATTGCATTCTTTCTTTCCGTTATGATCGGAGCGGTATACGGTATGTGCGCTGCAGCCCGGGGCAGTCTTGGTA
AAAAGCAGCCATTTCCGTTTGCGCCGGCCATCTCAGCCGGGAGCGCTTTGAGTTATTTATACGGTGATGAGCTGTTTTCG
TTTTACATCAAGCTCGCTTCAGGCGGGGCTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-90)

Type IV leader peptidase family (Peptidase_A24)

(101-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6A8LH02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

59.274

99.2

0.588