Detailed information NTG0692336

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MF619_RS01640
• Genome accession: NZ_CP097784
• Coordinates: 288956..290104 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain V 3.14
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 283956..295104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF619_RS01620 (MF619_000325)	-	284353..285036 (-)	684	WP_032857689.1	ABC transporter ATP-binding protein	-
MF619_RS01625 (MF619_000326)	-	285051..286487 (-)	1437	WP_095315717.1	ABC transporter permease	-
MF619_RS01630 (MF619_000327)	-	286700..287383 (+)	684	WP_024084885.1	response regulator transcription factor	-
MF619_RS01635 (MF619_000328)	-	287370..288803 (+)	1434	WP_161620115.1	sensor histidine kinase	-
MF619_RS01640 (MF619_000329)	rapC	288956..290104 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
MF619_RS01645 (MF619_000330)	phrC	290088..290207 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MF619_RS01650 (MF619_000331)	-	290358..290468 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
MF619_RS01655 (MF619_000332)	-	290548..291912 (-)	1365	WP_014304341.1	aspartate kinase	-
MF619_RS01660 (MF619_000333)	ceuB	292327..293280 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
MF619_RS01665 (MF619_000334)	-	293270..294217 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
MF619_RS01670 (MF619_000335)	-	294211..294969 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=692336 MF619_RS01640 WP_003156336.1 288956..290104(+) (rapC) [Bacillus velezensis strain V 3.14]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=692336 MF619_RS01640 WP_003156336.1 288956..290104(+) (rapC) [Bacillus velezensis strain V 3.14]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTCGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568