Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   MF621_RS11155 Genome accession   NZ_CP097779
Coordinates   2317708..2318508 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain R 4.6     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2312708..2323508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MF621_RS11125 (MF621_002216) - 2313255..2313887 (+) 633 WP_003153189.1 helix-turn-helix domain-containing protein -
  MF621_RS11130 (MF621_002217) - 2314178..2314315 (+) 138 WP_162918042.1 hypothetical protein -
  MF621_RS11135 (MF621_002218) - 2314409..2315527 (+) 1119 WP_025852854.1 NADH-dependent flavin oxidoreductase -
  MF621_RS11140 (MF621_002219) - 2315653..2315865 (+) 213 WP_003153183.1 spore germination protein -
  MF621_RS11145 (MF621_002220) - 2315991..2316203 (+) 213 WP_014305392.1 spore germination protein -
  MF621_RS11150 (MF621_002221) alr 2316379..2317560 (+) 1182 WP_025852858.1 alanine racemase -
  MF621_RS11155 (MF621_002222) spo0A 2317708..2318508 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  MF621_RS11160 (MF621_002223) spoIVB 2318789..2320069 (-) 1281 WP_007408360.1 SpoIVB peptidase -
  MF621_RS11165 (MF621_002224) recN 2320233..2321963 (-) 1731 WP_003153174.1 DNA repair protein RecN Machinery gene
  MF621_RS11170 (MF621_002225) ahrC 2321995..2322444 (-) 450 WP_003153173.1 transcriptional regulator AhrC/ArgR -
  MF621_RS11175 (MF621_002226) - 2322541..2323386 (-) 846 WP_003153172.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=692286 MF621_RS11155 WP_003153177.1 2317708..2318508(-) (spo0A) [Bacillus velezensis strain R 4.6]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=692286 MF621_RS11155 WP_003153177.1 2317708..2318508(-) (spo0A) [Bacillus velezensis strain R 4.6]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCCGATGTGCTCG
TGTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGTGAATCAGAGCTTGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCATCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCTGCGCAAAGCAGCATTATCCGCAGCCAGCCGGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAACCAACCAACTCAGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97