Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   MF621_RS00840 Genome accession   NZ_CP097779
Coordinates   177816..177980 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain R 4.6     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 172816..182980
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MF621_RS00835 (MF621_000167) srfAB 174761..177751 (+) 2991 Protein_150 surfactin non-ribosomal peptide synthetase SrfAB -
  MF621_RS00840 (MF621_000168) comS 177816..177980 (+) 165 WP_269195014.1 competence protein ComS Regulator
  MF621_RS21255 srfAB 177926..180670 (+) 2745 Protein_152 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=692256 MF621_RS00840 WP_269195014.1 177816..177980(+) (comS) [Bacillus velezensis strain R 4.6]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=692256 MF621_RS00840 WP_269195014.1 177816..177980(+) (comS) [Bacillus velezensis strain R 4.6]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains


Predicted by InterproScan.

(9-52)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5