Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   M9O74_RS15700 Genome accession   NZ_CP097719
Coordinates   3177468..3178097 (-) Length   209 a.a.
NCBI ID   WP_000839153.1    Uniprot ID   A0A9Q6Y251
Organism   Escherichia coli strain MS1679     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3172468..3183097
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9O74_RS15685 (M9O74_15670) helD 3172710..3174764 (-) 2055 WP_260838192.1 DNA helicase IV -
  M9O74_RS15690 (M9O74_15675) yccF 3174887..3175333 (+) 447 WP_001261236.1 YccF domain-containing protein -
  M9O74_RS15695 (M9O74_15680) yccS 3175343..3177505 (+) 2163 WP_000875041.1 YccS family putative transporter -
  M9O74_RS15700 (M9O74_15685) sxy/tfoX 3177468..3178097 (-) 630 WP_000839153.1 CRP-S regulon transcriptional coactivator Sxy Regulator
  M9O74_RS15705 (M9O74_15690) sulA 3178316..3178825 (+) 510 WP_000288705.1 SOS-induced cell division inhibitor SulA -
  M9O74_RS15710 (M9O74_15695) ompA 3179182..3180222 (+) 1041 WP_032284986.1 porin OmpA -
  M9O74_RS15715 (M9O74_15700) matP 3180298..3180750 (-) 453 WP_000877161.1 macrodomain Ter protein MatP -
  M9O74_RS15720 (M9O74_15705) ycbZ 3180936..3182696 (+) 1761 WP_000156476.1 AAA family ATPase -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 24147.02 Da        Isoelectric Point: 9.2180

>NTDB_id=691877 M9O74_RS15700 WP_000839153.1 3177468..3178097(-) (sxy/tfoX) [Escherichia coli strain MS1679]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=691877 M9O74_RS15700 WP_000839153.1 3177468..3178097(-) (sxy/tfoX) [Escherichia coli strain MS1679]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAACATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCTGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGGGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

100

100

1