Detailed information NTG0690999

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: M8965_RS06055
• Genome accession: NZ_CP097602
• Coordinates: 1175503..1176666 (+)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain UA0244
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1170503..1181666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8965_RS06035	-	1170943..1172139 (+)	1197	WP_032876154.1	glycosyltransferase	-
M8965_RS06040	-	1172272..1173348 (+)	1077	WP_003151382.1	MraY family glycosyltransferase	-
M8965_RS06045	-	1173447..1174628 (-)	1182	WP_032876157.1	LCP family protein	-
M8965_RS06050	-	1174633..1175280 (-)	648	WP_007614107.1	YigZ family protein	-
M8965_RS06055	degS	1175503..1176666 (+)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
M8965_RS06060	degU	1176743..1177432 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
M8965_RS06065	-	1177530..1178378 (+)	849	WP_032876160.1	DegV family protein	-
M8965_RS06070	comFA	1178487..1179872 (+)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
M8965_RS06075	-	1179930..1180214 (+)	285	WP_003151389.1	competence protein ComFB	-
M8965_RS06080	comFC	1180220..1180909 (+)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
M8965_RS06085	-	1180983..1181402 (+)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=690999 M8965_RS06055 WP_007407484.1 1175503..1176666(+) (degS) [Bacillus velezensis strain UA0244]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=690999 M8965_RS06055 WP_007407484.1 1175503..1176666(+) (degS) [Bacillus velezensis strain UA0244]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951