Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M8962_RS01690 Genome accession   NZ_CP097591
Coordinates   346585..347049 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain UA0188     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 341585..352049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8962_RS01670 - 342065..343885 (+) 1821 WP_023356869.1 PAS domain-containing protein -
  M8962_RS01675 - 343910..345079 (-) 1170 WP_023356870.1 aminotransferase A -
  M8962_RS01680 - 345280..345441 (-) 162 WP_007409608.1 hypothetical protein -
  M8962_RS01685 cheV 345630..346541 (+) 912 WP_012117435.1 chemotaxis protein CheV -
  M8962_RS01690 kre 346585..347049 (-) 465 WP_003154622.1 YkyB family protein Regulator
  M8962_RS01695 - 347172..348464 (-) 1293 WP_012117436.1 MFS transporter -
  M8962_RS01700 - 348540..349034 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  M8962_RS01705 - 349109..349972 (-) 864 WP_023356871.1 metallophosphoesterase -
  M8962_RS01710 fadH 350117..350881 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  M8962_RS01715 - 351046..351495 (+) 450 Protein_339 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=690752 M8962_RS01690 WP_003154622.1 346585..347049(-) (kre) [Bacillus velezensis strain UA0188]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=690752 M8962_RS01690 WP_003154622.1 346585..347049(-) (kre) [Bacillus velezensis strain UA0188]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929