Detailed information NTG0690742

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: M8970_RS17380
• Genome accession: NZ_CP097590
• Coordinates: 3561816..3562964 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain UA0195
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3556816..3567964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M8970_RS17360	-	3557219..3557902 (-)	684	WP_032872874.1	ABC transporter ATP-binding protein	-
M8970_RS17365	-	3557917..3559347 (-)	1431	WP_032872876.1	ABC transporter permease	-
M8970_RS17370	-	3559560..3560243 (+)	684	WP_032872879.1	response regulator transcription factor	-
M8970_RS17375	-	3560230..3561663 (+)	1434	WP_161503657.1	HAMP domain-containing sensor histidine kinase	-
M8970_RS17380	rapC	3561816..3562964 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
M8970_RS17385	phrC	3562948..3563067 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
M8970_RS17390	-	3563218..3563313 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
M8970_RS17395	-	3563408..3564772 (-)	1365	WP_007609394.1	aspartate kinase	-
M8970_RS17400	ceuB	3565186..3566139 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
M8970_RS17405	-	3566129..3567076 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
M8970_RS17410	-	3567070..3567828 (+)	759	WP_007609404.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=690742 M8970_RS17380 WP_007410270.1 3561816..3562964(+) (rapC) [Bacillus velezensis strain UA0195]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=690742 M8970_RS17380 WP_007410270.1 3561816..3562964(+) (rapC) [Bacillus velezensis strain UA0195]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTACCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAGGGGCTTCTCGATTATTACGTCAATTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTGGAGCAGGACACATATAACGTCCGGATTATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568