Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   M8970_RS07605 Genome accession   NZ_CP097590
Coordinates   1625586..1626353 (-) Length   255 a.a.
NCBI ID   WP_007408287.1    Uniprot ID   A0AAP3YCF1
Organism   Bacillus velezensis strain UA0195     
Function   ssDNA annealing; plasmid transformation (predicted from homology)   
DNA processing Homologous recombination

Genomic Context

Location: 1620586..1631353
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8970_RS07585 - 1620788..1621600 (-) 813 WP_003152991.1 pyruvate, water dikinase regulatory protein -
  M8970_RS07590 ccpN 1621626..1622264 (-) 639 WP_003152989.1 transcriptional regulator CcpN -
  M8970_RS07595 glyS 1622365..1624404 (-) 2040 WP_032873973.1 glycine--tRNA ligase subunit beta -
  M8970_RS07600 glyQ 1624397..1625284 (-) 888 WP_003152984.1 glycine--tRNA ligase subunit alpha -
  M8970_RS07605 recO 1625586..1626353 (-) 768 WP_007408287.1 DNA repair protein RecO Machinery gene
  M8970_RS07610 - 1626390..1626533 (-) 144 WP_007408286.1 YqzL family protein -
  M8970_RS07615 era 1626689..1627594 (-) 906 WP_007408285.1 GTPase Era -
  M8970_RS07620 - 1627575..1627985 (-) 411 WP_003152976.1 cytidine deaminase -
  M8970_RS07625 - 1628109..1628483 (-) 375 WP_015240233.1 diacylglycerol kinase family protein -
  M8970_RS07630 ybeY 1628464..1628937 (-) 474 WP_032873971.1 rRNA maturation RNase YbeY -
  M8970_RS07635 - 1628938..1631070 (-) 2133 WP_007408284.1 HD family phosphohydrolase -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29292.91 Da        Isoelectric Point: 8.5625

>NTDB_id=690708 M8970_RS07605 WP_007408287.1 1625586..1626353(-) (recO) [Bacillus velezensis strain UA0195]
MLTKCEGIVLRTNDYGETNKIVTLLTREHGKIGVMARGARKSASRLSAVSQPFLYGSFLMQRTSGLGTLQQGEMILSMRT
IREDLFLTAYAAFIAELTDKGTEEKKPNPYLFELILESFKRLNDGTDPDVITFIVQMKMLGVMGLYPELNHCVHCKSGEG
TFHFSIRDNGFICHRCFEKDPYRVPISPQTARLLRLFYYFDIGRLGSVSLKQETKNEIKRVIDLYYEEYSGLYLKSKRFL
DQMESMKNLLDENKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=690708 M8970_RS07605 WP_007408287.1 1625586..1626353(-) (recO) [Bacillus velezensis strain UA0195]
ATGCTGACTAAATGTGAAGGAATCGTGCTCCGTACGAATGACTACGGGGAGACGAATAAAATCGTGACATTGCTGACGAG
GGAACACGGCAAAATCGGCGTCATGGCAAGGGGCGCCAGGAAGTCAGCCAGCCGGCTGTCAGCAGTCAGCCAGCCGTTTT
TGTACGGGTCATTTTTAATGCAAAGAACATCCGGACTCGGCACGCTCCAGCAGGGTGAAATGATTCTCAGCATGAGAACG
ATCAGAGAAGATTTATTTTTGACGGCGTATGCCGCTTTTATCGCTGAACTCACTGACAAAGGAACGGAAGAGAAGAAACC
GAACCCCTATTTATTCGAATTGATTCTCGAATCCTTTAAGAGGCTGAATGACGGGACTGACCCGGACGTGATCACCTTCA
TCGTGCAGATGAAAATGCTCGGCGTCATGGGGCTGTATCCGGAGCTGAATCATTGTGTCCACTGCAAAAGCGGGGAAGGG
ACGTTTCATTTTTCGATAAGAGATAACGGGTTTATCTGCCACCGCTGCTTTGAAAAGGATCCGTACAGAGTTCCGATTTC
GCCGCAAACGGCAAGGCTGCTAAGGCTTTTTTATTACTTTGATATCGGAAGGCTCGGCAGCGTCTCGTTAAAACAGGAAA
CCAAAAACGAAATTAAACGGGTCATTGATCTGTATTACGAGGAATATTCAGGACTTTATTTAAAGTCAAAACGGTTTTTA
GATCAGATGGAAAGCATGAAGAACCTTTTGGATGAAAACAAAAGTTGA

Domains

Predicted by InterproScan.

Recombination protein O C terminal (RecO_C)

(82-237)

Recombination protein O N terminal (RecO_N)

(1-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Bacillus subtilis subsp. subtilis str. 168

89.02

100

0.89