Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M8961_RS12120 Genome accession   NZ_CP097588
Coordinates   2476926..2477726 (-) Length   266 a.a.
NCBI ID   WP_003153177.1    Uniprot ID   I2C7K5
Organism   Bacillus velezensis strain UA0323     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2471926..2482726
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8961_RS12090 - 2472463..2473095 (+) 633 WP_007408365.1 helix-turn-helix domain-containing protein -
  M8961_RS12095 - 2473392..2473529 (+) 138 WP_014470646.1 hypothetical protein -
  M8961_RS12100 - 2473623..2474741 (+) 1119 WP_015240192.1 NADH-dependent flavin oxidoreductase -
  M8961_RS12105 - 2474869..2475081 (+) 213 WP_007408362.1 spore germination protein -
  M8961_RS12110 - 2475207..2475419 (+) 213 WP_003153181.1 spore germination protein -
  M8961_RS12115 alr 2475596..2476777 (+) 1182 WP_012117960.1 alanine racemase -
  M8961_RS12120 spo0A 2476926..2477726 (-) 801 WP_003153177.1 sporulation transcription factor Spo0A Regulator
  M8961_RS12125 spoIVB 2478007..2479287 (-) 1281 WP_012117961.1 SpoIVB peptidase -
  M8961_RS12130 recN 2479451..2481181 (-) 1731 WP_012117962.1 DNA repair protein RecN Machinery gene
  M8961_RS12135 argR 2481213..2481662 (-) 450 WP_003153173.1 transcriptional regulator ArgR -
  M8961_RS12140 - 2481759..2482604 (-) 846 WP_007612503.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29630.11 Da        Isoelectric Point: 6.1630

>NTDB_id=690569 M8961_RS12120 WP_003153177.1 2476926..2477726(-) (spo0A) [Bacillus velezensis strain UA0323]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELEKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=690569 M8961_RS12120 WP_003153177.1 2476926..2477726(-) (spo0A) [Bacillus velezensis strain UA0323]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCAGATGTGCTCG
TTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGTTTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCG
AACGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGCGCGTCCTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGTATTATCCGCAGCCAGCCGGAACCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACTGCAAGCCGTGTAGAACGGG
CCATCCGCCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTTCACTGTTCGGATATACGGTAAGC
ATGACAAAAGCAAAGCCAACCAACTCGGAATTCATCGCGATGGTTGCTGACAAGCTGAGATTAGAGCATAAAGCTTCGTA
A

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C7K5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97