Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   STO1_RS02330 Genome accession   NZ_AP018338
Coordinates   468568..468861 (+) Length   97 a.a.
NCBI ID   WP_000797751.1    Uniprot ID   A0A224A4A2
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 463568..473861
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS02310 (STO1_004550) - 464127..467171 (+) 3045 WP_096422976.1 type I restriction endonuclease subunit R -
  STO1_RS02315 (STO1_004560) - 467304..467708 (+) 405 WP_096421790.1 YbgA family protein -
  STO1_RS02320 (STO1_004570) - 467692..468057 (+) 366 WP_096421792.1 TIGR02328 family protein -
  STO1_RS02325 (STO1_004580) - 468213..468578 (+) 366 WP_096421794.1 type II toxin-antitoxin system RelE/ParE family toxin -
  STO1_RS02330 (STO1_004590) HI0659 468568..468861 (+) 294 WP_000797751.1 helix-turn-helix domain-containing protein Machinery gene
  STO1_RS02335 (STO1_004600) metE 469122..471371 (+) 2250 WP_096421796.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  STO1_RS02340 (STO1_004610) metF 471466..472332 (+) 867 WP_002877494.1 methylenetetrahydrofolate reductase [NAD(P)H] -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10752.41 Da        Isoelectric Point: 5.1991

>NTDB_id=69048 STO1_RS02330 WP_000797751.1 468568..468861(+) (HI0659) [Streptococcus oralis subsp. tigurinus strain osk_001]
MKNSAIGSNWKDVRTELFTKEEILESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=69048 STO1_RS02330 WP_000797751.1 468568..468861(+) (HI0659) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGAAAAATAGCGCCATTGGGAGTAATTGGAAGGATGTCCGAACAGAACTCTTTACCAAGGAAGAAATTCTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATAGAAGCTAGACATGAGCAAGGTATTAGTCAGAAAAAGCTAGAAGAACTCA
GTGGAGTAAGCCAGCCTGTTATAGCTAGGATGGAGACAGGAAAGACCAGTCCTCAGTTGGATACGGTCTTAAAAGTCTTA
GCCAGTTTAGGAAAGACACTAGCAGTCGTCCCACTTGAACAGGAAAAAAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A224A4A2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment