Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M8957_RS06625 Genome accession   NZ_CP097587
Coordinates   1458177..1458641 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain UA0276     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1453177..1463641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8957_RS06600 - 1453731..1454180 (-) 450 Protein_1309 hypothetical protein -
  M8957_RS06605 fadH 1454345..1455109 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  M8957_RS06610 - 1455254..1456117 (+) 864 WP_023356871.1 metallophosphoesterase -
  M8957_RS06615 - 1456192..1456686 (+) 495 WP_088462390.1 L,D-transpeptidase family protein -
  M8957_RS06620 - 1456762..1458054 (+) 1293 WP_012117436.1 MFS transporter -
  M8957_RS06625 kre 1458177..1458641 (+) 465 WP_003154622.1 YkyB family protein Regulator
  M8957_RS06630 cheV 1458685..1459596 (-) 912 WP_012117435.1 chemotaxis protein CheV -
  M8957_RS06635 - 1459785..1459946 (+) 162 WP_007409608.1 hypothetical protein -
  M8957_RS06640 - 1460147..1461316 (+) 1170 WP_023356870.1 aminotransferase A -
  M8957_RS06645 - 1461341..1463161 (-) 1821 WP_023356869.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=690475 M8957_RS06625 WP_003154622.1 1458177..1458641(+) (kre) [Bacillus velezensis strain UA0276]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=690475 M8957_RS06625 WP_003154622.1 1458177..1458641(+) (kre) [Bacillus velezensis strain UA0276]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929