Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ORP33_RS16075 Genome accession   NZ_CP113256
Coordinates   3094874..3095734 (-) Length   286 a.a.
NCBI ID   WP_040081966.1    Uniprot ID   C0JBM1
Organism   Bacillus subtilis strain K1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3089874..3100734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS16040 (ORP33_15680) mrpE 3090112..3090588 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ORP33_RS16045 (ORP33_15685) mrpF 3090588..3090872 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ORP33_RS16050 (ORP33_15690) mnhG 3090856..3091230 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ORP33_RS16055 (ORP33_15695) yuxO 3091269..3091649 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  ORP33_RS16060 (ORP33_15700) comA 3091668..3092312 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ORP33_RS16065 (ORP33_15705) comP 3092393..3094690 (-) 2298 WP_267932966.1 histidine kinase Regulator
  ORP33_RS16070 (ORP33_15710) comX 3094698..3094859 (-) 162 WP_049140565.1 competence pheromone ComX -
  ORP33_RS16075 (ORP33_15715) comQ 3094874..3095734 (-) 861 WP_040081966.1 polyprenyl synthetase family protein Regulator
  ORP33_RS16080 (ORP33_15720) degQ 3095919..3096059 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ORP33_RS16085 - 3096281..3096406 (+) 126 WP_121549029.1 hypothetical protein -
  ORP33_RS16090 (ORP33_15725) - 3096520..3096888 (+) 369 WP_213414936.1 hypothetical protein -
  ORP33_RS16095 (ORP33_15730) pdeH 3096864..3098093 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ORP33_RS16100 (ORP33_15735) pncB 3098230..3099702 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ORP33_RS16105 (ORP33_15740) pncA 3099718..3100269 (-) 552 WP_015714627.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 286 a.a.        Molecular weight: 32484.39 Da        Isoelectric Point: 4.7419

>NTDB_id=690449 ORP33_RS16075 WP_040081966.1 3094874..3095734(-) (comQ) [Bacillus subtilis strain K1]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLGEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=690449 ORP33_RS16075 WP_040081966.1 3094874..3095734(-) (comQ) [Bacillus subtilis strain K1]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATGGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCTTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATATCATCCCATCGTGGCTTCTTATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCAATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGGAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(40-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBM1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441