Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ORP33_RS15275 Genome accession   NZ_CP113256
Coordinates   2956140..2956835 (-) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain K1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2951140..2961835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS15255 (ORP33_14905) yttA 2951567..2952313 (+) 747 WP_213414542.1 LMBR1 domain-containing protein -
  ORP33_RS15260 (ORP33_14910) bceB 2952350..2954290 (-) 1941 WP_213414541.1 FtsX-like permease family protein -
  ORP33_RS15265 (ORP33_14915) bceA 2954280..2955041 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  ORP33_RS15270 (ORP33_14920) bceS 2955143..2956147 (-) 1005 WP_095843886.1 two-component sensor histidine kinase BceS -
  ORP33_RS15275 (ORP33_14925) braR 2956140..2956835 (-) 696 WP_033884849.1 two-component response regulator BceR Regulator
  ORP33_RS15280 (ORP33_14930) ytrF 2956932..2958242 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  ORP33_RS15285 (ORP33_14935) ytrE 2958232..2958927 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  ORP33_RS15290 (ORP33_14940) ytrD 2958953..2959918 (-) 966 WP_213414540.1 ABC transporter permease YtrD -
  ORP33_RS15295 (ORP33_14945) ytrC 2959948..2960934 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  ORP33_RS15300 (ORP33_14950) ytrB 2960928..2961806 (-) 879 WP_004398506.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=690446 ORP33_RS15275 WP_033884849.1 2956140..2956835(-) (braR) [Bacillus subtilis strain K1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=690446 ORP33_RS15275 WP_033884849.1 2956140..2956835(-) (braR) [Bacillus subtilis strain K1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377