Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   M8964_RS11480 Genome accession   NZ_CP097585
Coordinates   2238905..2239369 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain UA1365     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2233905..2244369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8964_RS11460 - 2234385..2236205 (+) 1821 WP_023356869.1 PAS domain-containing protein -
  M8964_RS11465 - 2236230..2237399 (-) 1170 WP_023356870.1 aminotransferase A -
  M8964_RS11470 - 2237600..2237761 (-) 162 WP_007409608.1 hypothetical protein -
  M8964_RS11475 cheV 2237950..2238861 (+) 912 WP_012117435.1 chemotaxis protein CheV -
  M8964_RS11480 kre 2238905..2239369 (-) 465 WP_003154622.1 YkyB family protein Regulator
  M8964_RS11485 - 2239492..2240784 (-) 1293 WP_012117436.1 MFS transporter -
  M8964_RS11490 - 2240860..2241354 (-) 495 WP_088462390.1 L,D-transpeptidase family protein -
  M8964_RS11495 - 2241429..2242292 (-) 864 WP_023356871.1 metallophosphoesterase -
  M8964_RS11500 fadH 2242437..2243201 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  M8964_RS11505 - 2243366..2243815 (+) 450 Protein_2271 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=690418 M8964_RS11480 WP_003154622.1 2238905..2239369(-) (kre) [Bacillus velezensis strain UA1365]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=690418 M8964_RS11480 WP_003154622.1 2238905..2239369(-) (kre) [Bacillus velezensis strain UA1365]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929