Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   M8789_RS09630 Genome accession   NZ_CP097571
Coordinates   1966652..1967695 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain V40     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1961652..1972695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8789_RS09600 (M8789_09600) - 1962073..1963329 (-) 1257 WP_001793428.1 aminopeptidase -
  M8789_RS09605 (M8789_09605) - 1963332..1963532 (-) 201 WP_000180462.1 DUF1128 family protein -
  M8789_RS09610 (M8789_09610) - 1963679..1964143 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  M8789_RS09615 (M8789_09615) - 1964150..1964425 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  M8789_RS09620 (M8789_09620) - 1964703..1965920 (+) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  M8789_RS09625 (M8789_09625) vraR 1966033..1966662 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  M8789_RS09630 (M8789_09630) vraS 1966652..1967695 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  M8789_RS09635 (M8789_09635) liaF 1967692..1968393 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  M8789_RS09640 (M8789_09640) - 1968408..1968794 (-) 387 WP_001110175.1 hypothetical protein -
  M8789_RS09645 (M8789_09645) map 1969011..1969769 (-) 759 WP_250164280.1 type I methionyl aminopeptidase -
  M8789_RS09650 (M8789_09650) - 1970353..1971339 (+) 987 WP_000999713.1 FUSC family protein -
  M8789_RS09655 (M8789_09655) - 1971528..1971941 (-) 414 WP_078064660.1 hypothetical protein -
  M8789_RS09660 (M8789_09660) - 1971970..1972082 (-) 113 Protein_1866 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=690204 M8789_RS09630 WP_001017131.1 1966652..1967695(-) (vraS) [Staphylococcus aureus strain V40]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=690204 M8789_RS09630 WP_001017131.1 1966652..1967695(-) (vraS) [Staphylococcus aureus strain V40]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATTTTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1